RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CTU1Q7Z7A3 348 aaKnown RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CD101Q93033 1021 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 MIEF2Q96C03 454 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 LGMNQ99538 433 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SPATA16Q9BXB7 569 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CEP41Q9BYV8 373 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TBC1D23Q9NUY8 699 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CTNNAL1Q9UBT7 734 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 HMGXB4Q9UGU5 601 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SCML2Q9UQR0 700 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 AP2A1O95782 977 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 FGFR1P11362 822 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 VCLP18206 1134 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SEL1L3Q68CR1 1132 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF470Q6ECI4 717 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CPT1BQ92523 772 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 OMA1Q96E52 524 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SORCS3Q9UPU3 1222 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 HAS3O00219 553 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 MFSD11O43934 449 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 VPS4BO75351 444 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 THRAP10827 490 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 PIK3CGP48736 1102 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 RFTN1Q14699 578 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 FUKQ8N0W3 1084 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 NKAPQ8N5F7 415 aaKnown RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 PPP1R16AQ96I34 528 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 RXFP1Q9HBX9 757 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SFMBT1Q9UHJ3 866 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TBL1XO60907 577 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TCEA3O75764 348 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 MAPK1P28482 360 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SCTRP47872 440 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CDK18Q07002 472 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 INSCQ1MX18 579 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SIX5Q8N196 739 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 ATAD1Q8NBU5 361 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 PPP1R10Q96QC0 940 aaKnown RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 MLPHQ9BV36 600 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 DIABLOQ9NR28 239 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 WWOXQ9NZC7 414 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 MYH15Q9Y2K3 1946 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SOCS7O14512 581 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 LZTS3O60299 673 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TPH1P17752 444 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CD86P42081 329 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 GJA8P48165 433 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TRPC1P48995 793 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 IL10RBQ08334 325 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 HIST2H2ACQ16777 129 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 DAB2IPQ5VWQ8 1189 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 HIST2H2AA3Q6FI13 130 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 C17orf50Q8WW18 174 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF599Q96NL3 588 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 NUDT5Q9UKK9 219 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 TLE2Q04725 743 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 BMPR2Q13873 1038 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 HNRNPDQ14103 355 aaKnown RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 PTAR1Q7Z6K3 402 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 APLFQ8IW19 511 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 HIC2Q96JB3 615 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 STN1Q9H668 368 aaKnown RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 C10orf88Q9H8K7 445 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 FAM237BA0A1B0GVD1 139 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 TMEM114B3SHH9 223 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 GNGT2O14610 69 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 KPNA5O15131 536 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 ANP32DO95626 131 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 ENO1P06733 434 aaKnown RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 OR56A5P0C7T3 313 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 TTPAP49638 278 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SLC25A11Q02978 314 aaKnown RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SMG8Q8ND04 991 aaKnown RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 PCDH19Q8TAB3 1148 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 CORO1CQ9ULV4 474 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 TCAF2A6NFQ2 919 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 COL6A2P12110 1019 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 TNIP2Q8NFZ5 429 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 PRPF4O43172 522 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■□□ 16.8
SMAD9-201ENST00000350148 CALB2P22676 271 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 DDX6P26196 483 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 PBX3P40426 434 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SEMA5AQ13591 1074 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms