RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SLC8B1Q6J4K2 584 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 PRSS55Q6UWB4 352 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 BCL7CQ8WUZ0 217 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 SCLYQ96I15 445 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 RPRD1AQ96P16 312 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 WWP1Q9H0M0 922 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 HIPK3Q9H422 1215 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 RETREG1Q9H6L5 497 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 NT5MQ9NPB1 228 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 PAK6Q9NQU5 681 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 COPG2Q9UBF2 871 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 ZNF212Q9UDV6 495 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 MID2Q9UJV3 735 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 BACE2Q9Y5Z0 518 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 CDY1Q9Y6F8 540 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 MRPL42Q9Y6G3 142 aaKnown RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 J3KR12 359 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 TLR5O60602 858 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 SIN3BO75182 1162 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 ATP6V1G2O95670 118 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 C2P06681 752 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 CPA3P15088 417 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 DNAJB1P25685 340 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 PBX3P40426 434 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 SLC1A6P48664 564 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 KRT72Q14CN4 511 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 USP41Q3LFD5 358 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 KIAA0930Q6ICG6 404 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 LCA5Q86VQ0 697 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 ZC3HC1Q86WB0 502 aaKnown RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 TMEM173Q86WV6 379 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 PDZD8Q8NEN9 1154 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 MAGEC3Q8TD91 643 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 OVCA2Q8WZ82 227 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 SLC7A6OSQ96CW6 309 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-201ENST00000350028 ATXN7L3BQ96GX2 97 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 RANBP9Q96S59 729 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 OGDHLQ9ULD0 1010 aa16.93■□□□□ 0.3
SAMM50-201ENST00000350028 TET1Q8NFU7 2136 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 TANC1Q9C0D5 1861 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 RAMP2O60895 175 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 EFEMP2O95967 443 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 APOA4P06727 396 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 TACR2P21452 398 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 PTPN4P29074 926 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 ARCN1P48444 511 aaKnown RBP16.92■□□□□ 0.3
SAMM50-201ENST00000350028 ALDH7A1P49419 539 aaKnown RBP16.92■□□□□ 0.3
SAMM50-201ENST00000350028 GRM3Q14832 879 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 POLD3Q15054 466 aaPredicted RBP16.92■□□□□ 0.3
SAMM50-201ENST00000350028 ESRP1Q6NXG1 681 aaKnown RBP16.92■□□□□ 0.3
SAMM50-201ENST00000350028 ZCCHC23Q6ZST2 131 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 C10orf107Q8IVU9 208 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 WDR75Q8IWA0 830 aaKnown RBP16.92■□□□□ 0.3
SAMM50-201ENST00000350028 NSL1Q96IY1 281 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 DEFB118Q96PH6 123 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 C20orf27Q9GZN8 174 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 CCSER2Q9H7U1 834 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 ZNF395Q9H8N7 513 aaPredicted RBP16.92■□□□□ 0.3
SAMM50-201ENST00000350028 ATP13A1Q9HD20 1204 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 TREX1Q9NSU2 369 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 TLK1Q9UKI8 766 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
SAMM50-201ENST00000350028 CHUKO15111 745 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 VAPBO95292 243 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 CBX6O95503 412 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 MYCP01106 439 aaPredicted RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 RALBP11234 206 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 ATF6P18850 670 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 KCNA4P22459 653 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 ATP5C1P36542 298 aaKnown RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 CSRP3P50461 194 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 CCL23P55773 120 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 ITKQ08881 620 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 SLC10A7Q0GE19 358 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 SERINC3Q13530 473 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 THOC5Q13769 683 aaKnown RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 C5orf22Q49AR2 442 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 ANKRD33Q7Z3H0 272 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 ZNF354CQ86Y25 554 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 GABPB2Q8TAK5 448 aaPredicted RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 PPP4R1Q8TF05 950 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 SREK1Q8WXA9 508 aaKnown RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 PSMG2Q969U7 264 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 PABPC5Q96DU9 382 aaKnown RBP16.91■□□□□ 0.3
SAMM50-201ENST00000350028 FAM167BQ9BTA0 163 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 BAIAP2L1Q9UHR4 511 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 DNMT3LQ9UJW3 386 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 SLC39A10Q9ULF5 831 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 NUMBLQ9Y6R0 609 aa16.91■□□□□ 0.3
SAMM50-201ENST00000350028 CCDC78A2IDD5 438 aa16.9■□□□□ 0.3
SAMM50-201ENST00000350028 HEATR9A2RTY3 570 aa16.9■□□□□ 0.3
SAMM50-201ENST00000350028 F5H5T6 163 aa16.9■□□□□ 0.3
SAMM50-201ENST00000350028 GOLGA8TH3BQL2 631 aa16.9■□□□□ 0.3
SAMM50-201ENST00000350028 FCHO1O14526 889 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms