RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 TEX28O15482 410 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 MAFKO60675 156 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 AP2A1O95782 977 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 ABL2P42684 1182 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 SLC11A2P49281 568 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 ZBTB17Q13105 803 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 KPNB1Q14974 876 aaKnown RBP13.04□□□□□ -0.32
CLK3-201ENST00000345005 GSTA3Q16772 222 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 ANO4Q32M45 955 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 FBXL22Q6P050 247 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 DNAJB7Q7Z6W7 309 aaPredicted RBP13.04□□□□□ -0.32
CLK3-201ENST00000345005 CCNJLQ8IV13 435 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 STMN2Q93045 179 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 FATE1Q969F0 183 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 AZIN2Q96A70 460 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 MCUR1Q96AQ8 359 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 PPP1R2P1Q96PQ5 205 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 IL12RB2Q99665 862 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 NAT9Q9BTE0 207 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 FAM192AQ9GZU8 254 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
CLK3-201ENST00000345005 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 NDFIP2Q9NV92 336 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLK3-201ENST00000345005 ASB3Q9Y575 518 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 INSL5Q9Y5Q6 135 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 MAD1L1Q9Y6D9 718 aa13.04□□□□□ -0.32
CLK3-201ENST00000345005 TCRBV9S1A1TA0A576 114 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 F5H423 210 aaPredicted RBP13.03□□□□□ -0.32
CLK3-201ENST00000345005 F8W8V4 182 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 GYG2O15488 501 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 COCHO43405 550 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 ACSL4O60488 711 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 LINGO3P0C6S8 592 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 KRT4P19013 534 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 TACR2P21452 398 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 CD68P34810 354 aaPredicted RBP13.03□□□□□ -0.32
CLK3-201ENST00000345005 GRIA1P42261 906 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 PAPOLAP51003 745 aaKnown RBP13.03□□□□□ -0.32
CLK3-201ENST00000345005 KCNQ1P51787 676 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 ARFIP2P53365 341 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
CLK3-201ENST00000345005 SLC34A1Q06495 639 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 SLC1A5Q15758 541 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 TBCCQ15814 346 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
CLK3-201ENST00000345005 TRIM68Q6AZZ1 485 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 ZNF449Q6P9G9 518 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 RPRD1AQ96P16 312 aaPredicted RBP13.03□□□□□ -0.32
CLK3-201ENST00000345005 RAD9AQ99638 391 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 IKBKGQ9Y6K9 419 aa13.03□□□□□ -0.32
CLK3-201ENST00000345005 F5H5T6 163 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 PDLIM1O00151 329 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 AP3B1O00203 1094 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 KLF11O14901 512 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 GSC2O15499 205 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 CACNG3O60359 315 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 SMIM24O75264 130 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 FAM155BO75949 473 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 CNTN5O94779 1100 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 CXCL14O95715 111 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 LINC00271P0C7V0 271 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 NFKB1P19838 968 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 MAPKAPK2P49137 400 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 ZBTB16Q05516 673 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 C5orf22Q49AR2 442 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 KCTD11Q693B1 232 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 TFAP2DQ7Z6R9 452 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 MTDHQ86UE4 582 aaKnown RBP13.02□□□□□ -0.32
CLK3-201ENST00000345005 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 PHOSPHO2Q8TCD6 241 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 DTNBP1Q96EV8 351 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 NR1H4Q96RI1 486 aaPredicted RBP13.02□□□□□ -0.32
CLK3-201ENST00000345005 PAFAH2Q99487 392 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 NOL6Q9H6R4 1146 aaKnown RBP13.02□□□□□ -0.32
CLK3-201ENST00000345005 SLCO1B3Q9NPD5 702 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 PDP2Q9P2J9 529 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 STX18Q9P2W9 335 aaKnown RBP13.02□□□□□ -0.32
CLK3-201ENST00000345005 IPO11Q9UI26 975 aaKnown RBP13.02□□□□□ -0.32
CLK3-201ENST00000345005 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 AAR2Q9Y312 384 aaKnown RBP13.02□□□□□ -0.32
CLK3-201ENST00000345005 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.32
CLK3-201ENST00000345005 MAGEA13PA6NCF6 341 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 MAGEC1O60732 1142 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 ANXA9O76027 345 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 MT-ND3P03897 115 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 CNPP09543 421 aaKnown RBP13.02□□□□□ -0.33
CLK3-201ENST00000345005 CA8P35219 290 aa13.02□□□□□ -0.33
CLK3-201ENST00000345005 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms