RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 GRIK3Q13003 919 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 ZNF284Q2VY69 593 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 C11orf88Q6PI97 169 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 KIAA0408Q6ZU52 694 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 THAP5Q7Z6K1 395 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 USP12O75317 370 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 TCF3P15923 654 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 MSX2P35548 267 aaPredicted RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 TCAIMQ8N3R3 496 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 LZTR1Q8N653 840 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 SCAIQ8N9R8 606 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 KCTD4Q8WVF5 259 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 KLHL32Q96NJ5 620 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 MAGEL2Q9UJ55 1249 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 VAV3Q9UKW4 847 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 POMPQ9Y244 141 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 A0A087WZ62 844 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 H6PDO95479 791 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 LTFP02788 710 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 ADSLP30566 484 aaPredicted RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 YWHAZP63104 245 aaKnown RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 PHKG1Q16816 387 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 NEPROQ6NW34 567 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 SAPCD2Q86UD0 394 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 DEPDC4Q8N2C3 294 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 BANPQ8N9N5 519 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 TAMM41Q96BW9 452 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 RPRD1AQ96P16 312 aaPredicted RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 ALG9Q9H6U8 611 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 SMPD3Q9NY59 655 aaPredicted RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 RPS6KA6Q9UK32 745 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 SNX8Q9Y5X2 465 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 TKTL1P51854 596 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 RPS7P62081 194 aaKnown RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 ASTE1Q2TB18 679 aaPredicted RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 SKA1Q96BD8 255 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 MRPL48Q96GC5 212 aaKnown RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 CELF6Q96J87 481 aaKnown RBP18.27■□□□□ 0.52
SMC4-201ENST00000344722 PREBQ9HCU5 417 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 PPLO60437 1756 aa18.27■□□□□ 0.52
SMC4-201ENST00000344722 CCR1P32246 355 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 RPL7AP62424 266 aaKnown RBP18.27■□□□□ 0.51
SMC4-201ENST00000344722 ZNF484Q5JVG2 852 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 IL27RAQ6UWB1 636 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 SCUBE3Q8IX30 993 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 HM13Q8TCT9 377 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 ACER1Q8TDN7 264 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.51
SMC4-201ENST00000344722 IKZF3Q9UKT9 509 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 GSTM1P09488 218 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 ZNF37AP17032 561 aaPredicted RBP18.27■□□□□ 0.51
SMC4-201ENST00000344722 SHMT1P34896 483 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 CLCN5P51795 746 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 FNBP1LQ5T0N5 605 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 HIPK1Q86Z02 1210 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 ENDOVQ8N8Q3 282 aaKnown RBP18.27■□□□□ 0.51
SMC4-201ENST00000344722 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.51
SMC4-201ENST00000344722 TDRKHQ9Y2W6 561 aaKnown RBP18.27■□□□□ 0.51
SMC4-201ENST00000344722 G3V2T6 193 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 MTA2O94776 668 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 ITGALP20701 1170 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 HARS2P49590 506 aaKnown RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 SLC18A1P54219 525 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 RNASEH2BQ5TBB1 312 aaKnown RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 MARC1Q5VT66 337 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 SYTL5Q8TDW5 730 aaPredicted RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 SCUBE2Q9NQ36 999 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 ASLP04424 464 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 IDO1P14902 403 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 NPR3P17342 541 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 FSCN1Q16658 493 aaKnown RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 CACTIN-AS1Q8N1I8 211 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 ELMOD1Q8N336 334 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 LRRC17Q8N6Y2 441 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 PDCD2LQ9BRP1 358 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 SEMA4BQ9NPR2 832 aaPredicted RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 PXDNQ92626 1479 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 GNG14A0A1W2PPG7 69 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 PSMD10O75832 226 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 ODC1P11926 461 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 CDK9P50750 372 aaKnown RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 LAMTOR4Q0VGL1 99 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 ZSWIM7Q19AV6 140 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 ZNF549Q6P9A3 640 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 SLC30A10Q6XR72 485 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 SLC44A2Q8IWA5 706 aaPredicted RBP18.26■□□□□ 0.51
SMC4-201ENST00000344722 GMEB1Q9Y692 573 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 KCNQ2O43526 872 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 RENBPP51606 427 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 PGM5Q15124 567 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 C10orf120Q5SQS8 335 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 STAG3L4Q8TBR4 150 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 STARD8Q92502 1023 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 CPT1BQ92523 772 aa18.26■□□□□ 0.51
SMC4-201ENST00000344722 XPR1Q9UBH6 696 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms