RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 NEMP2A6NFY4 417 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 C2CD4BA6NLJ0 364 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 SLC31A1O15431 190 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 PCDH8O95206 1070 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 PRNPP04156 253 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 CALB1P05937 261 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 CTSLP07711 333 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 ADRA1BP35368 520 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 ACTN2P35609 894 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 GNA12Q03113 381 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 TYRO3Q06418 890 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 AGBL4Q5VU57 503 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 C22orf39Q6P5X5 142 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 LSMEM2Q8N112 164 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 RYBPQ8N488 228 aaPredicted RBP12.67□□□□□ -0.38
SGCA-202ENST00000344627 EID2Q8N6I1 236 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 OR2A12Q8NGT7 310 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 SNIP1Q8TAD8 396 aaKnown RBP12.67□□□□□ -0.38
SGCA-202ENST00000344627 FAM172AQ8WUF8 416 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 GRAMD1AQ96CP6 724 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 KLHDC7BQ96G42 594 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 PPP1R16AQ96I34 528 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 AGPAT1Q99943 283 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 KLHL11Q9NVR0 708 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 NCKIPSDQ9NZQ3 722 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 TRPM6Q9BX84 2022 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 PTPRBP23467 1997 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 ANKRD11Q6UB99 2663 aaPredicted RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 A0A1W2PQU0 124 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 PLEKP08567 350 aaPredicted RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 CCDC172P0C7W6 258 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 TNFAIP3P21580 790 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 GPD1P21695 349 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 AKT2P31751 481 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 ACVRL1P37023 503 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 EIF2S3P41091 472 aaKnown RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 DUSP3P51452 185 aaPredicted RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 DNAJC24Q6P3W2 148 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 STRADAQ7RTN6 431 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 KANSL1Q7Z3B3 1105 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 BNIPLQ7Z465 357 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 ARRDC3Q96B67 414 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 TBC1D31Q96DN5 1066 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 LRIG1Q96JA1 1093 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 ERGIC2Q96RQ1 377 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 DUSP23Q9BVJ7 150 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 OSBPL2Q9H1P3 480 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 PPARGC1AQ9UBK2 798 aaKnown RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 CLCA2Q9UQC9 943 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 CA5BQ9Y2D0 317 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 FCF1Q9Y324 198 aaKnown RBP12.66□□□□□ -0.38
SGCA-202ENST00000344627 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
SGCA-202ENST00000344627 KNTC1P50748 2209 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
SGCA-202ENST00000344627 PLXNB3Q9ULL4 1909 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 SMTNL1A8MU46 457 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 LEFTY1O75610 366 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 GP1BAP07359 652 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 PRLRP16471 622 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 FERP16591 822 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 RHOQP17081 205 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 DESP17661 470 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 HNRNPA2B1P22626 353 aaKnown RBP12.65□□□□□ -0.38
SGCA-202ENST00000344627 ETFBP38117 255 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 PTPN9P43378 593 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 SERPINH1P50454 418 aaKnown RBP12.65□□□□□ -0.38
SGCA-202ENST00000344627 PTP4A2Q12974 167 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 TARDBPQ13148 414 aaKnown RBP eCLIP12.65□□□□□ -0.38
SGCA-202ENST00000344627 NCAPHQ15003 741 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 CARD16Q5EG05 197 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 EFHC2Q5JST6 749 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 PIP5KL1Q5T9C9 394 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 HES3Q5TGS1 186 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 DCUN1D2Q6PH85 259 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 LEKR1Q6ZMV7 388 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 DPY19L3Q6ZPD9 716 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 ERN2Q76MJ5 926 aaKnown RBP12.65□□□□□ -0.38
SGCA-202ENST00000344627 SLFN11Q7Z7L1 901 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 PHF13Q86YI8 300 aaPredicted RBP12.65□□□□□ -0.38
SGCA-202ENST00000344627 PLPP6Q8IY26 295 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 PCDH20Q8N6Y1 951 aaKnown RBP12.65□□□□□ -0.38
SGCA-202ENST00000344627 CCDC185Q8N715 623 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 DCBLD1Q8N8Z6 715 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 TMEM145Q8NBT3 493 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 FGF11Q92914 225 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 HEPHQ9BQS7 1158 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 HDAC8Q9BY41 377 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 MAGEB5Q9BZ81 275 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 TM6SF2Q9BZW4 377 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 CEP44Q9C0F1 390 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms