RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 DSC3Q14574 896 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 MAPRE1Q15691 268 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 TRMT5Q32P41 509 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 BRMS1LQ5PSV4 323 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 DENND5AQ6IQ26 1287 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 ZNF354CQ86Y25 554 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 MFSD6LQ8IWD5 586 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 MIEF2Q96C03 454 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 SUSD3Q96L08 255 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 FCRL5Q96RD9 977 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 MCMBPQ9BTE3 642 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 TRPV6Q9H1D0 765 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 TNFRSF10BO14763 440 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC35E2BP0CK96 405 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 CD1EP15812 388 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 ALOX15P16050 662 aaPredicted RBP15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 GRK4P32298 578 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 MAXP61244 160 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 ITKQ08881 620 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 EIF4EBP2Q13542 120 aaPredicted RBP15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 RGMBQ6NW40 437 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 CEP97Q8IW35 865 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 HIPK4Q8NE63 616 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 SGF29Q96ES7 293 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 ANKRD27Q96NW4 1050 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 OMDQ99983 421 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 TRIM62Q9BVG3 475 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 C1QTNF1Q9BXJ1 281 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 OXSMQ9NWU1 459 aa15.1■□□□□ 0.01
VIPAS39-202ENST00000343765 TTC24A2A3L6 582 aaPredicted RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 FGF10O15520 208 aaPredicted RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 SEPT4O43236 478 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ADAMTS4O75173 837 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ARNTP27540 789 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 CYP2C18P33260 490 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC1A2P43004 574 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ZNF470Q6ECI4 717 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ZNF280DQ6N043 979 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 EPGNQ6UW88 154 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 FRMD7Q6ZUT3 714 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ELMO2Q96JJ3 720 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 IL12RB2Q99665 862 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 FAM96AQ9H5X1 160 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 XPR1Q9UBH6 696 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 FAM95CA0A1B0GW59 222 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 AURKAO14965 403 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 PSMD3O43242 534 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 SBK3P0C264 359 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 SERPINB5P36952 375 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 GEMP55040 296 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ACTR3P61158 418 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 PRKCZQ05513 592 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 MANEALQ5VSG8 457 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 CENPLQ8N0S6 344 aaPredicted RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 FSTL5Q8N475 847 aaPredicted RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 KLHL5Q96PQ7 755 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 ILKAPQ9H0C8 392 aaPredicted RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 C1orf21Q9H246 121 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 BATF3Q9NR55 127 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 IPO11Q9UI26 975 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 PPM1HQ9ULR3 514 aa15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 TDRD15B5MCY1 1934 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-202ENST00000343765 CACNG3O60359 315 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 DDHD2O94830 711 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 PIGNO95427 931 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 ACADSP16219 412 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 EPHA3P29320 983 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 OR1G1P47890 313 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 SLC12A1Q13621 1099 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 ARL13AQ5H913 290 aaPredicted RBP15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 PIK3R6Q5UE93 754 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 ZYG11AQ6WRX3 759 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 SAPCD2Q86UD0 394 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 LMNTD2Q8IXW0 634 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 DEFB107AQ8IZN7 70 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 CCNYL1Q8N7R7 359 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 NXNL1Q96CM4 212 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 MRGPRX2Q96LB1 330 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 NUF2Q9BZD4 464 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 UPF3AQ9H1J1 476 aaKnown RBP15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 TCF7L2Q9NQB0 619 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 PACSIN3Q9UKS6 424 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 TCAF1Q9Y4C2 921 aa15.08■□□□□ 0.01
VIPAS39-202ENST00000343765 TMEM114B3SHH9 223 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 F8W8V4 182 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 AP3B1O00203 1094 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 SOAT2O75908 522 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 ANPEPP15144 967 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 ELNP15502 786 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 BLMHQ13867 455 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 LIPMQ5VYY2 423 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 KBTBD2Q8IY47 623 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 SCML4Q8N228 414 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 TTC9BQ8N6N2 239 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 RTL3Q8N8U3 475 aaKnown RBP15.08■□□□□ 0
VIPAS39-202ENST00000343765 PPFIBP2Q8ND30 876 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 PYDC1Q8WXC3 89 aa15.08■□□□□ 0
VIPAS39-202ENST00000343765 PABPC5Q96DU9 382 aaKnown RBP15.08■□□□□ 0
VIPAS39-202ENST00000343765 CMTM5Q96DZ9 223 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms