RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 FAM13CQ8NE31 585 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 SPATA20Q8TB22 786 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 GIMAP1Q8WWP7 306 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 NELFBQ8WX92 580 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 SEC14L1Q92503 715 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 HGH1Q9BTY7 390 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 SLC7A5P2Q9GIP4 190 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 RSPH9Q9H1X1 276 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 TMEM245Q9H330 911 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ZHX3Q9H4I2 956 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 DMAC2Q9NW81 257 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 EURLQ9NYK6 297 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 RCCD1A6NED2 376 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 TERTO14746 1132 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 MAGEB3O15480 346 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ADAM12O43184 909 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SHBGP04278 402 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ENGP17813 658 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SERPINB3P29508 390 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SLC6A4P31645 630 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SH3PXD2AQ5TCZ1 1133 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ZNF720Q7Z2F6 126 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 TREML1Q86YW5 311 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 NUP93Q8N1F7 819 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 MFSD2AQ8NA29 543 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 INPP5DQ92835 1189 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 WBP2Q969T9 261 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 CEP44Q9C0F1 390 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 DPP3Q9NY33 737 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SCHIP1Q9P0W5 487 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 HCSTQ9UBK5 93 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 LRWD1Q9UFC0 647 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 LIMA1Q9UHB6 759 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 LSM7Q9UK45 103 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 TTC7AQ9ULT0 858 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ZNF711Q9Y462 761 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 RFPL3O75679 317 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SUN1O94901 812 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 OXSR1O95747 527 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 EGFP01133 1207 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 HLA-EP13747 358 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 PLA2G2AP14555 144 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 CHN1P15882 459 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ANXA13P27216 316 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 CTNNA1P35221 906 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 PAFAH1B1P43034 410 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 NOVA1P51513 510 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ARFIP2P53365 341 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 RELAQ04206 551 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 AP1B1Q10567 949 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 MDM1Q8TC05 714 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SMARCD1Q96GM5 515 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 C7orf25Q9BPX7 421 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 LACRTQ9GZZ8 138 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ISCUQ9H1K1 167 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 TXLNGQ9NUQ3 528 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 TOR4AQ9NXH8 423 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 VPS54Q9P1Q0 977 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 CNTN6Q9UQ52 1028 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 PIP5K1CO60331 668 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 LCA5LO95447 670 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 MSL3P1P0C860 447 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 COL6A2P12110 1019 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ETFBP38117 255 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ZNF135P52742 658 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 EIF4EBP2Q13542 120 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 CUL1Q13616 776 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 DHCR24Q15392 516 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 FAM209AQ5JX71 171 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 EEF1DP3Q658K8 133 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 KLHL35Q6PF15 583 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 DTHD1Q6ZMT9 781 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ZC3H18Q86VM9 953 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 FAM186BQ8IYM0 893 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 RIBC1Q8N443 379 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 FITM2Q8N6M3 262 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 IL17RCQ8NAC3 791 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 OR2W6PQ8NHA6 318 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 DTX3LQ8TDB6 740 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 BTN2A2Q8WVV5 523 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 NRG4Q8WWG1 115 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SMAD5Q99717 465 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ORAI3Q9BRQ5 295 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 UCK1Q9HA47 277 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SPHK2Q9NRA0 654 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 ARL2BPQ9Y2Y0 163 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.48□□□□□ -1.21
ZNF540-202ENST00000343599 SLC30A1Q9Y6M5 507 aa7.48□□□□□ -1.21
ZNF540-202ENST00000343599 A0A1W2PR77 199 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 TTC34A8MYJ7 566 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 LEFTY2O00292 366 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 KRT37O76014 449 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 FBXO21O94952 628 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 SRGAP2CP0DJJ0 459 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 ITGB7P26010 798 aa7.47□□□□□ -1.21
ZNF540-202ENST00000343599 MATR3P43243 847 aaKnown RBP eCLIP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms