RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 HSP90AA5PQ58FG0 334 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 ADGRF1Q5T601 910 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 TEDDM1Q5T9Z0 273 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 GRTP1Q5TC63 336 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 TMCO4Q5TGY1 634 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 KCNMB4Q86W47 210 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 PPHLN1Q8NEY8 458 aaKnown RBP20.29■□□□□ 0.84
RTN1-202ENST00000342503 OR7D4Q8NG98 312 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 CLP1Q92989 425 aaKnown RBP20.29■□□□□ 0.84
RTN1-202ENST00000342503 ZFRQ96KR1 1074 aaKnown RBP20.29■□□□□ 0.84
RTN1-202ENST00000342503 SLC22A12Q96S37 553 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 AGAP2Q99490 1192 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 TXNDC16Q9P2K2 825 aa20.29■□□□□ 0.84
RTN1-202ENST00000342503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.28■□□□□ 0.84
RTN1-202ENST00000342503 SNX3O60493 162 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 CLDN11O75508 207 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 ITGA2BP08514 1039 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 DHRS4L1P0CG22 281 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 CHRNA4P43681 627 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 IHHQ14623 411 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 TXNDC8Q6A555 127 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 CGB2Q6NT52 195 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 POTEHQ6S545 545 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 FAM47EQ6ZV65 393 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 NDUFAF2Q8N183 169 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 ARRDC2Q8TBH0 407 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 ZNF75CPQ92670 426 aaPredicted RBP20.28■□□□□ 0.84
RTN1-202ENST00000342503 SLC13A1Q9BZW2 595 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 IQCGQ9H095 443 aaKnown RBP20.28■□□□□ 0.84
RTN1-202ENST00000342503 PRKAG2Q9UGJ0 569 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 ASB3Q9Y575 518 aa20.28■□□□□ 0.84
RTN1-202ENST00000342503 EN2P19622 333 aaPredicted RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 HOXD9P28356 352 aaPredicted RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 SMAD3P84022 425 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 ITIH4Q14624 930 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 PABPC1LQ4VXU2 614 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 TMEM240Q5SV17 173 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 IL31Q6EBC2 164 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 CHST9Q7L1S5 443 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 TMC7Q7Z402 723 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 STRA8Q7Z7C7 330 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 UBE2Q1Q7Z7E8 422 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 HERC6Q8IVU3 1022 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 SLC25A41Q8N5S1 370 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 ARL14EPQ8N8R7 260 aaPredicted RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 RBBP8Q99708 897 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 DDX50Q9BQ39 737 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 PITPNM3Q9BZ71 974 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 VPS11Q9H270 941 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 ATP13A1Q9HD20 1204 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 VPS45Q9NRW7 570 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 IARS2Q9NSE4 1012 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 PLLPQ9Y342 182 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 RRP15Q9Y3B9 282 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 TCAF1Q9Y4C2 921 aa20.27■□□□□ 0.84
RTN1-202ENST00000342503 ATXN2Q99700 1313 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 MKI67P46013 3256 aaKnown RBP20.27■□□□□ 0.84
RTN1-202ENST00000342503 TPP1O14773 563 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 ALDOAP04075 364 aaKnown RBP20.27■□□□□ 0.83
RTN1-202ENST00000342503 RHOCP08134 193 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 F7P08709 466 aaPredicted RBP20.27■□□□□ 0.83
RTN1-202ENST00000342503 LILRA6Q6PI73 481 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 SRLQ86TD4 932 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 HS6ST3Q8IZP7 471 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 ANKS4BQ8N8V4 417 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 TADA1Q96BN2 335 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 ZNF599Q96NL3 588 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 SPON2Q9BUD6 331 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 ARNT2Q9HBZ2 717 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 MRM3Q9HC36 420 aaKnown RBP20.27■□□□□ 0.83
RTN1-202ENST00000342503 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.83
RTN1-202ENST00000342503 STOML2Q9UJZ1 356 aa20.27■□□□□ 0.83
RTN1-202ENST00000342503 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.26■□□□□ 0.83
RTN1-202ENST00000342503 ANKRD65E5RJM6 399 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 MUSKO15146 869 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 KDELR3O43731 214 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 OLFM2O95897 454 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 LRG1P02750 347 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 GABRR2P28476 465 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 CRHR1P34998 444 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 CYP4F8P98187 520 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 ZNF177Q13360 481 aaPredicted RBP20.26■□□□□ 0.83
RTN1-202ENST00000342503 ZNF235Q14590 738 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 PDPK2PQ6A1A2 396 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 SPATA21Q7Z572 469 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 ACMSDQ8TDX5 336 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 ADAMTS19Q8TE59 1207 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 PTCD2Q8WV60 388 aaKnown RBP20.26■□□□□ 0.83
RTN1-202ENST00000342503 SLCO1B3Q9NPD5 702 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 PHTF1Q9UMS5 762 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 USP15Q9Y4E8 981 aaPredicted RBP20.26■□□□□ 0.83
RTN1-202ENST00000342503 ACTL7AQ9Y615 435 aa20.26■□□□□ 0.83
RTN1-202ENST00000342503 A0A1B0GVM2 712 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 ILVBLA1L0T0 632 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 TCAF2A6NFQ2 919 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 GOLGA8TH3BQL2 631 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 SCAMP3O14828 347 aaKnown RBP20.25■□□□□ 0.83
RTN1-202ENST00000342503 GJB3O75712 270 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 HDCP19113 662 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 SPRP35270 261 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms