RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ATP13A1Q9HD20 1204 aa21.53■■□□□ 1.04
VRK2-201ENST00000340157 BFARQ9NZS9 450 aa21.53■■□□□ 1.04
VRK2-201ENST00000340157 OR51B4Q9Y5P0 310 aa21.53■■□□□ 1.04
VRK2-201ENST00000340157 CCDC195A0A1B0GUA6 201 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 UGT1A9O60656 530 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 XYLBO75191 536 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 DDX6P26196 483 aaKnown RBP eCLIP21.52■■□□□ 1.04
VRK2-201ENST00000340157 ATP5DP30049 168 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 OXCT1P55809 520 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 WNT3AP56704 352 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 MPP3Q13368 585 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 RANBP10Q6VN20 620 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 LINC00523Q86TU6 105 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 ARFGAP2Q8N6H7 521 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 TDRD5Q8NAT2 981 aaKnown RBP21.52■■□□□ 1.04
VRK2-201ENST00000340157 ZSWIM3Q96MP5 696 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 PPP1R2P1Q96PQ5 205 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 GDF15Q99988 308 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 NAT9Q9BTE0 207 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 UGT1A7Q9HAW7 530 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 UGT1A10Q9HAW8 530 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 UGT1A8Q9HAW9 530 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 ZNF510Q9Y2H8 683 aa21.52■■□□□ 1.04
VRK2-201ENST00000340157 CCDC85CA6NKD9 419 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 FAM155BO75949 473 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 PRAMEF12O95522 483 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 CD160O95971 181 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 MSH2P43246 934 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 CHRNA4P43681 627 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 NPY2RP49146 381 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 ARF5P84085 180 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 ITKQ08881 620 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 CYS1Q717R9 158 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 TMEM135Q86UB9 458 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 CCNJLQ8IV13 435 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 SRRM1Q8IYB3 904 aaKnown RBP21.52■■□□□ 1.03
VRK2-201ENST00000340157 LEMD2Q8NC56 503 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 VN1R2Q8NFZ6 395 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 ALG14Q96F25 216 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 CAPS2Q9BXY5 557 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 KIF9Q9HAQ2 790 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 CLEC4EQ9ULY5 219 aa21.52■■□□□ 1.03
VRK2-201ENST00000340157 ANKRD36A6QL64 1941 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 C5orf42Q9H799 3197 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 MYO9BQ13459 2157 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 H0Y626 953 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 ATP9BO43861 1147 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 ZMPSTE24O75844 475 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 POU2F2P09086 479 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 AVPR1AP37288 418 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 MDH1P40925 334 aaKnown RBP21.51■■□□□ 1.03
VRK2-201ENST00000340157 PCSK7Q16549 785 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 COL13A1Q5TAT6 717 aaPredicted RBP21.51■■□□□ 1.03
VRK2-201ENST00000340157 RNF43Q68DV7 783 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 ALG1LQ6GMV1 187 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 ZNF783Q6ZMS7 281 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 KDELC2Q7Z4H8 507 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 C12orf76Q8N812 135 aaPredicted RBP21.51■■□□□ 1.03
VRK2-201ENST00000340157 PPM1NQ8N819 430 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 NSMCE3Q96MG7 304 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 SELENOSQ9BQE4 189 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 IL22Q9GZX6 179 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 MUC3BQ9H195 1237 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 UBA2Q9UBT2 640 aaPredicted RBP21.51■■□□□ 1.03
VRK2-201ENST00000340157 RPS6KL1Q9Y6S9 549 aa21.51■■□□□ 1.03
VRK2-201ENST00000340157 NUP210Q8TEM1 1887 aaPredicted RBP21.51■■□□□ 1.03
VRK2-201ENST00000340157 A0A1W2PPM1 405 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 CBX4O00257 560 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 SNAP91O60641 907 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 CEBPBP17676 345 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 DUSP6Q16828 381 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 TAOK1Q7L7X3 1001 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 LRRC6Q86X45 466 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 SEMA3CQ99985 751 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 MGME1Q9BQP7 344 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 FEM1AQ9BSK4 669 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 FSD1LQ9BXM9 530 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 TLE6Q9H808 572 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 CHRAC1Q9NRG0 131 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 VPS45Q9NRW7 570 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 PLK2Q9NYY3 685 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 IL1RAPL1Q9NZN1 696 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 SAMD15Q9P1V8 674 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 SLC17A6Q9P2U8 582 aa21.5■■□□□ 1.03
VRK2-201ENST00000340157 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.49■■□□□ 1.03
VRK2-201ENST00000340157 ZCWPW2A0A1B0GU75 182 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.49■■□□□ 1.03
VRK2-201ENST00000340157 E2F8A0AVK6 867 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 CSKP41240 450 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 RGRP47804 291 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 NRIP1P48552 1158 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 GNGT1P63211 74 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 KCNC3Q14003 757 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 MPP2Q14168 576 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ZNF235Q14590 738 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 ARHGAP15Q53QZ3 475 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 PPP2R2DQ66LE6 453 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 TPGS1Q6ZTW0 290 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 CTAGE3PQ8IX95 158 aa21.49■■□□□ 1.03
VRK2-201ENST00000340157 DDI1Q8WTU0 396 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms