RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 LRRC38Q5VT99 294 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 BBS12Q6ZW61 710 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 SNX32Q86XE0 403 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 TMEM192Q8IY95 271 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 UNC5BQ8IZJ1 945 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 KBTBD7Q8WVZ9 684 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 GCOM2Q9BZD3 368 aaPredicted RBP12.79□□□□□ -0.36
DFFB-202ENST00000339350 PORCNQ9H237 461 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 CDH22Q9UJ99 828 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 PSMD13Q9UNM6 376 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 TRAF6Q9Y4K3 522 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 TRIP11Q15643 1979 aa12.79□□□□□ -0.36
DFFB-202ENST00000339350 GOLGA8QA0A0J9YX86 632 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 GOLGA8OA6NCC3 632 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 GOLGA8NF8WBI6 632 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 H3BNH8 94 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 KCNN4O15554 427 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 DYNC1LI2O43237 492 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 APRTP07741 180 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 F7P08709 466 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 CNTN2Q02246 1040 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 NRF1Q16656 503 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 HADHQ16836 314 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 ZBED5Q49AG3 693 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 C16orf46Q6P387 395 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 TRMT10BQ6PF06 316 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 DCP2Q8IU60 420 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 SLC44A1Q8WWI5 657 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 NIF3L1Q9GZT8 377 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 B3GNT3Q9Y2A9 372 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 MYRFQ9Y2G1 1151 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 JRKO75564 520 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 PAHP00439 452 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 SUPT20HL2P0C7V6 817 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 PTGS2P35354 604 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 HPCAL1P37235 193 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 MRPS5P82675 430 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 ROR1Q01973 937 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 PRR23BQ6ZRT6 265 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 FRA10AC1Q70Z53 315 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 ZC3H7AQ8IWR0 971 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 ZFPM2Q8WW38 1151 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 SDCCAG3Q96C92 435 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 RMND5BQ96G75 393 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 CCDC106Q9BWC9 280 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 FRMD8Q9BZ67 464 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 MAGEB5Q9BZ81 275 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 ATP13A3Q9H7F0 1226 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 CXorf21Q9HAI6 301 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 SCPEP1Q9HB40 452 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 ARMC1Q9NVT9 282 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 SNTG2Q9NY99 539 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 STRIP2Q9ULQ0 834 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 E7ESA3 106 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 I3L4J1 428 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 IDUAP35475 653 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 RACK1P63244 317 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 FAM102AQ5T9C2 384 aaPredicted RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 SLFN12LQ6IEE8 588 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 FAM9CQ8IZT9 166 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 NSUN6Q8TEA1 469 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 APOL6Q9BWW8 343 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 TDRD1Q9BXT4 1180 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 C1orf21Q9H246 121 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 MOV10Q9HCE1 1003 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 DNMT3BQ9UBC3 853 aaKnown RBP12.78□□□□□ -0.36
DFFB-202ENST00000339350 STYXL1Q9Y6J8 313 aa12.78□□□□□ -0.36
DFFB-202ENST00000339350 ADGRA2Q96PE1 1338 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 MGAMO43451 1857 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 TOM1L1O75674 476 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 KRT7P08729 469 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 DHRS4L1P0CG22 281 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 POLR2CP19387 275 aaPredicted RBP12.77□□□□□ -0.36
DFFB-202ENST00000339350 GRIA1P42261 906 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 C10orf62Q5T681 223 aaPredicted RBP12.77□□□□□ -0.36
DFFB-202ENST00000339350 PXDC1Q5TGL8 231 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 AKAP14Q86UN6 197 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 CAND1Q86VP6 1230 aaKnown RBP12.77□□□□□ -0.36
DFFB-202ENST00000339350 CHERPQ8IWX8 916 aaKnown RBP12.77□□□□□ -0.36
DFFB-202ENST00000339350 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 MPP5Q8N3R9 675 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 UBR7Q8N806 425 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 E2F7Q96AV8 911 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 SSU72Q9NP77 194 aaKnown RBP12.77□□□□□ -0.36
DFFB-202ENST00000339350 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.36
DFFB-202ENST00000339350 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.36
DFFB-202ENST00000339350 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms