RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 TRIM74Q86UV6 250 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 TRIM73Q86UV7 250 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 EPHX4Q8IUS5 362 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 RFWD2Q8NHY2 731 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 NECTIN3Q9NQS3 549 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 FAM50BQ9Y247 325 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 PCDHA10Q9Y5I2 948 aa2.6□□□□□ -1.99
XRCC4-202ENST00000338635 TMEM247A6NEH6 219 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 AGAP5A6NIR3 686 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 MBD3L5A6NJ08 208 aaPredicted RBP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 FAM72CH0Y354 149 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 SLC22A3O75751 556 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 SLC5A1P13866 664 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 GSTM2P28161 218 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 SSTR2P30874 369 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 AKT1P31749 480 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 RPL3P39023 403 aaKnown RBP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 RCAN1P53805 252 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 ALDH18A1P54886 795 aaKnown RBP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 NLRP5P59047 1200 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 FAM72AQ5TYM5 149 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 TMEM268Q5VZI3 342 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 ARL6IP4Q66PJ3 421 aaKnown RBP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 FAM72DQ6L9T8 149 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 KIAA1324Q6UXG2 1013 aaKnown RBP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 RNF144BQ7Z419 303 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 FAM72BQ86X60 149 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 NRSN1Q8IZ57 195 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 GPT2Q8TD30 523 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 MTBPQ96DY7 904 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 FRG2BQ96QU4 278 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 NPAS1Q99742 590 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 ZNF696Q9H7X3 374 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 CLK4Q9HAZ1 481 aaKnown RBP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 STARD7Q9NQZ5 370 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 DDX21Q9NR30 783 aaKnown RBP eCLIP2.59□□□□□ -1.99
XRCC4-202ENST00000338635 LRFN1Q9P244 771 aa2.59□□□□□ -1.99
XRCC4-202ENST00000338635 SLC38A8A6NNN8 435 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 BAG4O95429 457 aaKnown RBP2.58□□□□□ -2
XRCC4-202ENST00000338635 LARGE1O95461 756 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 DDAH2O95865 285 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 ATP1A1P05023 1023 aaKnown RBP2.58□□□□□ -2
XRCC4-202ENST00000338635 FMO4P31512 558 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 DPP6P42658 865 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 SF3A3Q12874 501 aaKnown RBP eCLIP2.58□□□□□ -2
XRCC4-202ENST00000338635 PMS2P11Q13670 270 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 SLC1A5Q15758 541 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 RAB30Q15771 203 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 CALCRLQ16602 461 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 SETMARQ53H47 684 aaPredicted RBP2.58□□□□□ -2
XRCC4-202ENST00000338635 BSPRYQ5W0U4 402 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 SLC26A9Q7LBE3 791 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 WDR5BQ86VZ2 330 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 ANKRD13AQ8IZ07 590 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 VPS52Q8N1B4 723 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 ZNF566Q969W8 418 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 MSTO1Q9BUK6 570 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 DDX23Q9BUQ8 820 aaKnown RBP2.58□□□□□ -2
XRCC4-202ENST00000338635 IFT27Q9BW83 186 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 TRIM31Q9BZY9 425 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 NPFFR1Q9GZQ6 430 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 ZNF334Q9HCZ1 680 aaPredicted RBP2.58□□□□□ -2
XRCC4-202ENST00000338635 ZFP57Q9NU63 452 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 DDX43Q9NXZ2 648 aaKnown RBP2.58□□□□□ -2
XRCC4-202ENST00000338635 OSGIN2Q9Y236 505 aa2.58□□□□□ -2
XRCC4-202ENST00000338635 CHL1O00533 1208 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 EXTL3O43909 919 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 IGHV4-30-4P0DP06 118 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 EEF1GP26641 437 aaKnown RBP2.57□□□□□ -2
XRCC4-202ENST00000338635 SLC35G1Q2M3R5 365 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 NEK10Q6ZWH5 1172 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 ZNF441Q8N8Z8 693 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 TTC17Q96AE7 1141 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 OR1F2PQ96R84 312 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 TBCBQ99426 244 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 EBF2Q9HAK2 575 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 PDE11AQ9HCR9 933 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 TMEM51Q9NW97 253 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 APAF1O14727 1248 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 TIMM23O14925 209 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 HNRNPDLO14979 420 aaKnown RBP2.57□□□□□ -2
XRCC4-202ENST00000338635 DNPH1O43598 174 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 PARNO95453 639 aaKnown RBP2.57□□□□□ -2
XRCC4-202ENST00000338635 VNN2O95498 520 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 FGF5P12034 268 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 NPPBP16860 134 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 AZU1P20160 251 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 TIMP3P35625 211 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 PCP4P48539 62 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 CLCN3P51790 818 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 KRTAP10-8P60410 259 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 PMP22Q01453 160 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 CDK18Q07002 472 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 ZBTB17Q13105 803 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 ALKBH1Q13686 389 aaKnown RBP2.57□□□□□ -2
XRCC4-202ENST00000338635 NCAPH2Q6IBW4 605 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 C19orf48Q6RUI8 117 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 TMC8Q8IU68 726 aa2.57□□□□□ -2
XRCC4-202ENST00000338635 CIARTQ8N365 385 aaPredicted RBP2.57□□□□□ -2
XRCC4-202ENST00000338635 KBTBD3Q8NAB2 608 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms