RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CD86P42081 329 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MLLT1Q03111 559 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IFFO1Q0D2I5 559 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RFTN1Q14699 578 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CYTH1Q15438 398 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CCDC38Q502W7 563 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CEP85LQ5SZL2 805 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PALM2Q8IXS6 379 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MPP5Q8N3R9 675 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DCAF4L2Q8NA75 395 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IPMKQ8NFU5 416 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LMLNQ96KR4 655 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SIGLEC10Q96LC7 697 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FAM161BQ96MY7 647 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PPP1R2P1Q96PQ5 205 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MYADMQ96S97 322 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CINPQ9BW66 212 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 POLR1EQ9GZS1 481 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 VPS37BQ9H9H4 285 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ABCB8Q9NUT2 735 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 INTS6Q9UL03 887 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TRIOBPQ9H2D6 2365 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GJB3O75712 270 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 AGTP01019 485 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MMP2P08253 660 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FCARP24071 287 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MGAT1P26572 445 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 HLA-FP30511 346 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SSTR1P30872 391 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GPX6P59796 221 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZNF844Q08AG5 666 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GPS2Q13227 327 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DHCR24Q15392 516 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 EML3Q32P44 896 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PLEKHG6Q3KR16 790 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ASTLQ6HA08 431 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TANGO2Q6ICL3 276 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 NAPEPLDQ6IQ20 393 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 KIAA1958Q8N8K9 716 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 NAT16Q8N8M0 369 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DNAAF3Q8N9W5 541 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ARRDC2Q8TBH0 407 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ASIC4Q96FT7 647 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PSKH2Q96QS6 385 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SEMA3CQ99985 751 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TBL1YQ9BQ87 522 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 C2orf49Q9BVC5 232 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TRPV4Q9HBA0 871 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CASS4Q9NQ75 786 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FAM53CQ9NYF3 392 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MARK1Q9P0L2 795 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MAD1L1Q9Y6D9 718 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SYF2O95926 243 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CPP00450 1065 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 POU3F3P20264 500 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GBP2P32456 591 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 EIF3BP55884 814 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CRADDP78560 199 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MPP3Q13368 585 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IHHQ14623 411 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PCSK7Q16549 785 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 C3orf62Q6ZUJ4 267 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 KDELC2Q7Z4H8 507 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ATP11CQ8NB49 1132 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LRRC39Q96DD0 335 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CFAP36Q96G28 342 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 EXOC2Q96KP1 924 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MRGPRX2Q96LB1 330 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MGME1Q9BQP7 344 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FICDQ9BVA6 458 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZFP14Q9HCL3 533 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OBP2AQ9NY56 170 aa14.97□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SDR42E2A6NKP2 422 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SOX1O00570 391 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OPA1O60313 960 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TMCC1O94876 653 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MT-CO1P00395 513 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CYP17A1P05093 508 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ABHD2P08910 425 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ARSAP15289 507 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ADRA1AP35348 466 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RGRP47804 291 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PLK1P53350 603 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 WNT3AP56704 352 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SLC12A1Q13621 1099 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PITRM1Q5JRX3 1037 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RETSATQ6NUM9 610 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CASC4Q6P4E1 433 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 KDELC1Q6UW63 502 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LINC00523Q86TU6 105 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RNF135Q8IUD6 432 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ACDQ96AP0 544 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MSLNLQ96KJ4 702 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 EBNA1BP2Q99848 306 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FSD1LQ9BXM9 530 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 EBF3Q9H4W6 596 aa14.96□□□□□ -0.01
CDK5RAP3-201ENST00000338399 POMKQ9H5K3 350 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms