RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HAUS8Q9BT25 410 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MLPHQ9BV36 600 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 POMKQ9H5K3 350 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM161AQ9NX61 479 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 PLLPQ9Y342 182 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 IRAK2O43187 625 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 LYPLA1O75608 230 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 ESRRBO95718 433 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 CRHR1P34998 444 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RAB10P61026 200 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 TPGS1Q6ZTW0 290 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 RDH11Q8TC12 318 aa6.38□□□□□ -1.39
PRKDC-202ENST00000338368 MRPL17Q9NRX2 175 aaKnown RBP6.38□□□□□ -1.39
PRKDC-202ENST00000338368 A0A087X1B8 175 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF865P0CJ78 1059 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 RHOQP17081 205 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 GJA5P36382 358 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SNX30Q5VWJ9 437 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 DENND1CQ8IV53 801 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 RNF148Q8N7C7 305 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SPOCK2Q92563 424 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 JADE3Q92613 823 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 DEFB118Q96PH6 123 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 MAN1C1Q9NR34 630 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 NHSL1Q5SYE7 1610 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 KCNU1A8MYU2 1149 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 MYO1DO94832 1006 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HOXA11P31270 313 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HCAR3P49019 387 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 OLFML1Q6UWY5 402 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 EXOC2Q96KP1 924 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CDRT15Q96T59 188 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 C2orf49Q9BVC5 232 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CIPCQ9C0C6 399 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TMPRSS4Q9NRS4 437 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PNPOQ9NVS9 261 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 WWOXQ9NZC7 414 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 EEF1B2P24534 225 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 RPL14P50914 215 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TRMT5Q32P41 509 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 NCBP2-AS2Q69YL0 99 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PIWIL4Q7Z3Z4 852 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SNX32Q86XE0 403 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 C7orf26Q96N11 449 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SRRDQ9UH36 339 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PCDHGB4Q9UN71 923 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 AURKCQ9UQB9 309 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 UBTFL6P0CB48 400 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SGO1Q5FBB7 561 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 ARMC12Q5T9G4 340 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CAPRIN2Q6IMN6 1127 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 FAM43BQ6ZT52 329 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 YAF2Q8IY57 180 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CFAP52Q8N1V2 620 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CATSPER1Q8NEC5 780 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 STAG3L4Q8TBR4 150 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HDAC10Q969S8 669 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TRMT13Q9NUP7 481 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 BTN3A1O00481 513 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 NRP1O14786 923 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 ACADSP16219 412 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 MRPS35P82673 323 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PPM1JQ5JR12 505 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 BNC2Q6ZN30 1099 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CTU1Q7Z7A3 348 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 GMIPQ9P107 970 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 ORC6Q9Y5N6 252 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SYCE1LA8MT33 242 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 BPGMP07738 259 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HLA-DPA1P20036 260 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 EPHA3P29320 983 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HTR7P34969 479 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 GLUD2P49448 558 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SLC25A3Q00325 362 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TMCO4Q5TGY1 634 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 FUT10Q6P4F1 479 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 ANGPTL8Q6UXH0 198 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 CLNKQ7Z7G1 428 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SMOQ99835 787 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 EMILIN2Q9BXX0 1053 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 GBA3Q9H227 469 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 RHOJQ9H4E5 214 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 IQCF3P0C7M6 154 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PTPN3P26045 913 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PTK2BQ14289 1009 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 INSCQ1MX18 579 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 AGKQ53H12 422 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HIPK3Q9H422 1215 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 SPATS2LQ9NUQ6 558 aaKnown RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 HDAC3O15379 428 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 TPST1O60507 370 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 GPR32O75388 356 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 PROCP04070 461 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 LRPAP1P30533 357 aa6.37□□□□□ -1.39
PRKDC-202ENST00000338368 MSLNQ13421 630 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-202ENST00000338368 VARS2Q5ST30 1063 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms