RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SLC22A12Q96S37 553 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 PPARGC1AQ9UBK2 798 aaKnown RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 TLR6Q9Y2C9 796 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 MATN3O15232 486 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 FGFR3P22607 806 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 GP5P40197 560 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 IRX1P78414 480 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 CDH17Q12864 832 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 BRMS1LQ5PSV4 323 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 DENND5AQ6IQ26 1287 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 MARK2Q7KZI7 788 aaKnown RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 OR6P1Q8NGX9 317 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 FBXO27Q8NI29 283 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 BLOC1S5Q8TDH9 187 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 KCTD4Q8WVF5 259 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 NMUR2Q9GZQ4 415 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 RNF38Q9H0F5 515 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 FBXO44Q9H4M3 255 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 ACTR5Q9H9F9 607 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-201ENST00000336180 FETUBQ9UGM5 382 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 DNAJC16Q9Y2G8 782 aa12.77□□□□□ -0.37
LIMK1-201ENST00000336180 EME2A4GXA9 379 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 AHSGP02765 367 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 MLNP12872 115 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 ARSAP15289 507 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 CD1EP15812 388 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 USP10Q14694 798 aaKnown RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 POLD3Q15054 466 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 MFSD6LQ8IWD5 586 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 SLC39A13Q96H72 371 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 VPS39Q96JC1 886 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 TSEN34Q9BSV6 310 aaKnown RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 ZYG11BQ9C0D3 744 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 ZNF180Q9UJW8 692 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 GGA2Q9UJY4 613 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 NCAM2O15394 837 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 C2P06681 752 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 BPGMP07738 259 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 T-ENOLP0DO92 83 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 TSHRP16473 764 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 AIF1P55008 147 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 CDK16Q00536 496 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 STX3Q13277 289 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 GPR17Q13304 367 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 RASA2Q15283 850 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 GALNTL6Q49A17 601 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 RBM20Q5T481 1227 aaKnown RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 GET4Q7L5D6 327 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 OR6K2Q8NGY2 324 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 C8orf48Q96LL4 319 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
LIMK1-201ENST00000336180 EIF2B3Q9NR50 452 aaKnown RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 UXTQ9UBK9 157 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-201ENST00000336180 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 MEI4A8MW99 385 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ALDH1A2O94788 518 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 HAUS5O94927 633 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 GSRP00390 522 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ENO1P06733 434 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CSF2RAP15509 400 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 NQO1P15559 274 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CCNCP24863 283 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ARSDP51689 593 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 PLK1P53350 603 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SEMG2Q02383 582 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 KDSRQ06136 332 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 FBXO48Q5FWF7 155 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SPANXN3Q5MJ09 141 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 MARC1Q5VT66 337 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 NAPEPLDQ6IQ20 393 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CNSTQ6PJW8 725 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 NAPRTQ6XQN6 538 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SHKBP1Q8TBC3 707 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 DPF3Q92784 378 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 TRHDEQ9UKU6 1024 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 GOLGA8QA0A0J9YX86 632 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 GOLGA8OA6NCC3 632 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 GOLGA8NF8WBI6 632 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 H0Y3Z8 333 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 SYN3O14994 580 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 PLIN3O60664 434 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 RAMP2O60895 175 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 RASSF9O75901 435 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 KLKB1P03952 638 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 RPLP2P05387 115 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 ARNTP27540 789 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 RGRP47804 291 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 MRPL58Q14197 206 aaKnown RBP12.75□□□□□ -0.37
LIMK1-201ENST00000336180 RNF43Q68DV7 783 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 TMEM135Q86UB9 458 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 CEP97Q8IW35 865 aa12.75□□□□□ -0.37
LIMK1-201ENST00000336180 POU5F2Q8N7G0 328 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms