RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TCRBV21S2A2A0A5A6 115 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 PRR33A8MZF0 331 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 KIF2AO00139 706 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 DLL1O00548 723 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 LIASO43766 372 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 NEBLO76041 1014 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 IGSF6O95976 241 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 JCHAINP01591 159 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 RBL1P28749 1068 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 AVPR2P30518 371 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 MMP13P45452 471 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 RECQLP46063 649 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 CCR3P51677 355 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 DGKEP52429 567 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 SNRPD1P62314 119 aaKnown RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 IFI35P80217 286 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 CAMK2GQ13555 558 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 SNX1Q13596 522 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 ATXN7L2Q5T6C5 722 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 STK40Q8N2I9 435 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 RYBPQ8N488 228 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 DTWD2Q8NBA8 298 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 TSEN2Q8NCE0 465 aaKnown RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 OR2A12Q8NGT7 310 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 SLC35B2Q8TB61 432 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 EXOC2Q96KP1 924 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 CCDC114Q96M63 670 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 HHIPQ96QV1 700 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 C1QTNF1Q9BXJ1 281 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 AP1M1Q9BXS5 423 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 CEP41Q9BYV8 373 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 POLMQ9NP87 494 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 NT5MQ9NPB1 228 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 RBM22Q9NW64 420 aaKnown RBP eCLIP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 DNPEPQ9ULA0 475 aa14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-202ENST00000335760 MUSKO15146 869 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 MTSS1O43312 755 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 GSRP00390 522 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 RGRP47804 291 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 ITKQ08881 620 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZBTB17Q13105 803 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 FAM182AQ5T1J6 154 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 HEATR6Q6AI08 1181 aaKnown RBP14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 MAMSTRQ6ZN01 415 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 DPY19L3Q6ZPD9 716 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 PGBD5Q8N414 524 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 CHST14Q8NCH0 376 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 TSTD1Q8NFU3 115 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 OR2AP1Q8NGE2 309 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 OR2T3Q8NH03 318 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 HTR3CQ8WXA8 447 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 OR8D1Q8WZ84 308 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 GDAP1L1Q96MZ0 367 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 PSKH2Q96QS6 385 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 FAM129BQ96TA1 746 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 CD248Q9HCU0 757 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 HECAQ9UBI9 543 aaPredicted RBP14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 TTLL3Q9Y4R7 772 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 CKAP5Q14008 2032 aa14.3□□□□□ -0.12
APOBEC3B-202ENST00000335760 BCLAF3A2AJT9 711 aaKnown RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 RNF103O00237 685 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 KRIT1O00522 736 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 KCNN4O15554 427 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZBTB24O43167 697 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 LAMTOR5O43504 91 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 HLA-DQB2P05538 268 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 PTPN3P26045 913 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 PAFAH1B1P43034 410 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 CCNHP51946 323 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 COPAP53621 1224 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 MAXP61244 160 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 NSUN2Q08J23 767 aaKnown RBP eCLIP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 WASHC5Q12768 1159 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 BYSLQ13895 437 aaKnown RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 ELAVL3Q14576 367 aaKnown RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 CCNG2Q16589 344 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 MYLK3Q32MK0 819 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 SRLQ86TD4 932 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 PLPP6Q8IY26 295 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 OR6K2Q8NGY2 324 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF419Q96HQ0 510 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 AGAP3Q96P47 875 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 MGME1Q9BQP7 344 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 SLC6A17Q9H1V8 727 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZDHHC6Q9H6R6 413 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 FBRSQ9HAH7 460 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 HAUS2Q9NVX0 235 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 AMACRQ9UHK6 382 aa14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 EVLQ9UI08 416 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-202ENST00000335760 TTC24A2A3L6 582 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 K7ESF4 209 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 INSIG1O15503 277 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 RNASEH1O60930 286 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 GJB3O75712 270 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms