RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CALUO43852 315 aaPredicted RBP8.72□□□□□ -1.01
TDP1-201ENST00000335725 KCNH1O95259 989 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 CPNE6O95741 557 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 TP53P04637 393 aaPredicted RBP8.72□□□□□ -1.01
TDP1-201ENST00000335725 KRT19P08727 400 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 NELFEP18615 380 aaKnown RBP8.72□□□□□ -1.01
TDP1-201ENST00000335725 CYP2C18P33260 490 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 ADD2P35612 726 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 GRK3P35626 688 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 MCAMP43121 646 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 ATP2C1P98194 919 aaPredicted RBP8.72□□□□□ -1.01
TDP1-201ENST00000335725 MGAT3Q09327 533 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 PPP1R3AQ16821 1122 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 TEDDM1Q5T9Z0 273 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 XXYLT1Q8NBI6 393 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 PSMA8Q8TAA3 256 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 TCP10LQ8TDR4 215 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 KCTD10Q9H3F6 313 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 TMEM216Q9P0N5 145 aa8.72□□□□□ -1.01
TDP1-201ENST00000335725 C7orf72A4D263 438 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ANGPT2O15123 496 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 NIPSNAP2O75323 286 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 PPM1BO75688 479 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 SEC14L2O76054 403 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 MYL4P12829 197 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 IFI30P13284 250 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ENO3P13929 434 aaPredicted RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 ITGB6P18564 788 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 MYF6P23409 242 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 MLLT10P55197 1068 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 RPL10AP62906 217 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 IL1RL1Q01638 556 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 TRIM25Q14258 630 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 NEDD8Q15843 81 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 KCTD19Q17RG1 926 aaPredicted RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 PAGE2BQ5JRK9 111 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 GNASQ5JWF2 1037 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 GPATCH4Q5T3I0 446 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 BBS12Q6ZW61 710 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 SVOPQ8N4V2 548 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 SLC7A14Q8TBB6 771 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ZFAND1Q8TCF1 268 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ZFP90Q8TF47 636 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 PDCD6IPQ8WUM4 868 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 ASB12Q8WXK4 309 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 PROX1Q92786 737 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 TMEM68Q96MH6 324 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 IL12RB2Q99665 862 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 COQ10BQ9H8M1 238 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ABCB10Q9NRK6 738 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.014e-6■■■□□ 19.2
TDP1-201ENST00000335725 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 PPP2R3BQ9Y5P8 575 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 MED1Q15648 1581 aaPredicted RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 PCM1Q15154 2024 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 HEATR9A2RTY3 570 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 DBX1A6NMT0 343 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 M0R3G1 203 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 CPNE3O75131 537 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 NR3C2P08235 984 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 HOXD4P09016 255 aaPredicted RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 GRIA3P42263 894 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ITGA8P53708 1063 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 PTPN5P54829 565 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 NME5P56597 212 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ACTR2P61160 394 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 NR5A1Q13285 461 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ZMYND11Q15326 602 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 DCAF12L1Q5VU92 463 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 RINT1Q6NUQ1 792 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 ABRAXAS1Q6UWZ7 409 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 C16orf89Q6UX73 402 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 IL17RDQ8NFM7 739 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 OR6S1Q8NH40 331 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 ZDHHC12Q96GR4 267 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 MAGEB10Q96LZ2 347 aaPredicted RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 TBATAQ96M53 351 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 TTYH2Q9BSA4 534 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 GTPBP2Q9BX10 602 aaKnown RBP8.71□□□□□ -1.01
TDP1-201ENST00000335725 TM9SF3Q9HD45 589 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 PLSCR3Q9NRY6 295 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 RAB23Q9ULC3 237 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 COPS3Q9UNS2 423 aa8.71□□□□□ -1.01
TDP1-201ENST00000335725 UBE4BO95155 1302 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 IGSF1Q8N6C5 1336 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ANKRD63C9JTQ0 380 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ZNF213O14771 459 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ALBP02768 609 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 CPB1P15086 417 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 GABREP78334 506 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ZNF211Q13398 564 aaPredicted RBP8.71□□□□□ -1.02
TDP1-201ENST00000335725 CLEC16AQ2KHT3 1053 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ZNF276Q8N554 614 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 PACRGLQ8N7B6 248 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms