RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 STAG3L4Q8TBR4 150 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SERAC1Q96JX3 654 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 FAM129BQ96TA1 746 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PCDHGB3Q9Y5G1 929 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 KLHL33A6NCF5 533 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L15C9J2P7 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L13C9JLJ4 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L11C9JVI0 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L18D6R9N7 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L22D6RA61 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L17D6RBQ6 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L19D6RCP7 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L20D6RJB6 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SEC22BO75396 215 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SRPRAP08240 638 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 LTA4HP09960 611 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CYP2A6P11509 494 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 FBLN1P23142 703 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L24Q0WX57 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 GPR107Q5VW38 600 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 USP17L6PQ6QN14 398 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 RPTNQ6XPR3 784 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MCOLN3Q8TDD5 553 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PHF10Q8WUB8 498 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 HTR3CQ8WXA8 447 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TBL1YQ9BQ87 522 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PRKAG3Q9UGI9 489 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CEP170BQ9Y4F5 1589 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MOCS2O96007 188 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 E2F2Q14209 437 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TRIM40Q6P9F5 258 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MFSD7Q6UXD7 560 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PAGE2Q7Z2X7 111 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 DNAJC10Q8IXB1 793 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 DENND2DQ9H6A0 471 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 WDR70Q9NW82 654 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ROBO3Q96MS0 1386 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 KMOO15229 486 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PDPK1O15530 556 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 RPS6KA4O75676 772 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PENKP01210 267 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 S100A3P33764 101 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 GRIA3P42263 894 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CCNHP51946 323 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CYP24A1Q07973 514 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 DGCR6Q14129 220 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 FGD3Q5JSP0 725 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ATF7IP2Q5U623 682 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 OLFML2AQ68BL7 652 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ULK3Q6PHR2 472 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PGAM4Q8N0Y7 254 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SPERTQ8NA61 448 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 AIFM3Q96NN9 605 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PHF12Q96QT6 1004 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM109Q9BVC6 243 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MID1IP1Q9NPA3 183 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SAE1Q9UBE0 346 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PITPNM1O00562 1244 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 MAGEB3O15480 346 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PRKAB2O43741 272 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 UGT2B17O75795 530 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CLCN5P51795 746 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 AP1S1P61966 158 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ZNHIT3Q15649 155 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ARHGAP15Q53QZ3 475 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CHSY1Q86X52 802 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 UNC5BQ8IZJ1 945 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TTC29Q8NA56 475 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 THUMPD1Q9NXG2 353 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 TRPS1Q9UHF7 1281 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 LMO7Q8WWI1 1683 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 SERPIND1P05546 499 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 OR56A5P0C7T3 313 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 EIF4BP23588 611 aaKnown RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 PRKCIP41743 596 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 IL2P60568 153 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 IL31Q6EBC2 164 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 RNF19BQ6ZMZ0 732 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 OAFQ86UD1 273 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 DNAJC11Q9NVH1 559 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 CLIC5Q9NZA1 410 aa5.58□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF214Q9UL59 606 aaPredicted RBP5.58□□□□□ -1.52
PTPRB-202ENST00000334414 H7C2Y5 167 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 PPEF2O14830 753 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 DCXO43602 365 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 SERPINB7O75635 380 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 MYCP01106 439 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CSH1P0DML2 217 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CSH2P0DML3 217 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 C7P10643 843 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 LHX1P48742 406 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 C16orf86Q6ZW13 317 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 ADCK2Q7Z695 626 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 NT5DC3Q86UY8 548 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 CREG2Q8IUH2 290 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 DRAXINQ8NBI3 349 aaPredicted RBP5.57□□□□□ -1.52
PTPRB-202ENST00000334414 OR2T34Q8NGX1 318 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 OR2T3Q8NH03 318 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 KBTBD7Q8WVZ9 684 aa5.57□□□□□ -1.52
PTPRB-202ENST00000334414 TCEAL4Q96EI5 215 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms