RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NBNO60934 754 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 SKAP2O75563 359 aaPredicted RBP17.64■□□□□ 0.41
DDX28-201ENST00000332395 CPB1P15086 417 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 GM2AP17900 193 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 GABRB3P28472 473 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 HARS2P49590 506 aaKnown RBP17.64■□□□□ 0.41
DDX28-201ENST00000332395 GATMP50440 423 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 ALFQ53S48 1182 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 WASHC2DQ5SRD0 308 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 RAPH1Q70E73 1250 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 KDELC2Q7Z4H8 507 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 DOCK4Q8N1I0 1966 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 ATP6V0D2Q8N8Y2 350 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 HMCESQ96FZ2 354 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 DENND2DQ9H6A0 471 aaPredicted RBP17.64■□□□□ 0.41
DDX28-201ENST00000332395 NMRAL1Q9HBL8 299 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 MRM3Q9HC36 420 aaKnown RBP17.64■□□□□ 0.41
DDX28-201ENST00000332395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDX28-201ENST00000332395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDX28-201ENST00000332395 TMEM248Q9NWD8 314 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 SLC27A5Q9Y2P5 690 aa17.64■□□□□ 0.41
DDX28-201ENST00000332395 ENPP3O14638 875 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 PEX11AO75192 247 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 CNTN5O94779 1100 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 AHSGP02765 367 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 ENO1P06733 434 aaKnown RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 FGFR3P22607 806 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 ARNTP27540 789 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 ARCN1P48444 511 aaKnown RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 CCNHP51946 323 aaPredicted RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 HNRNPDQ14103 355 aaKnown RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 UGP2Q16851 508 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 NAIF1Q69YI7 327 aaPredicted RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 MIB1Q86YT6 1006 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 DENND6AQ8IWF6 608 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 DBF4BQ8NFT6 615 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 BTN2A3PQ96KV6 586 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 CASD1Q96PB1 797 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 CCDC106Q9BWC9 280 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 SLC25A51Q9H1U9 297 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 PNPOQ9NVS9 261 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 MARCH5Q9NX47 278 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 BPTFQ12830 3046 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 IGLV3-10A0A075B6K4 115 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 J3KR12 359 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 TRPA1O75762 1119 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 RTN3O95197 1032 aaPredicted RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 SAT1P21673 171 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 CHRNA4P43681 627 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 RENBPP51606 427 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 WNT3AP56704 352 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 TAF10Q12962 218 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 TUBB3Q13509 450 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 USP10Q14694 798 aaKnown RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 TBCCQ15814 346 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 PCSK7Q16549 785 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 MCUR1Q96AQ8 359 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 HMX1Q9NP08 348 aaPredicted RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 TLR8Q9NR97 1041 aaKnown RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 OLA1Q9NTK5 396 aaKnown RBP17.63■□□□□ 0.41
DDX28-201ENST00000332395 MARCH2Q9P0N8 246 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 HCSTQ9UBK5 93 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 SLC2A6Q9UGQ3 507 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 TLK1Q9UKI8 766 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 ANKRD6Q9Y2G4 727 aa17.63■□□□□ 0.41
DDX28-201ENST00000332395 MTMR11A4FU01 709 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SMNDC1O75940 238 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX28-201ENST00000332395 ALDH2P05091 517 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 HAPLN1P10915 354 aaPredicted RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 CPA2P48052 419 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 CCNG1P51959 295 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 MPP1Q00013 466 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 CTBP1Q13363 440 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 RCN2Q14257 317 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 GPNMBQ14956 572 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 CNGA3Q16281 694 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 MGAT5BQ3V5L5 792 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 C10orf120Q5SQS8 335 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 RFWD3Q6PCD5 774 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 KDELC1Q6UW63 502 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 MAVSQ7Z434 540 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 TEX9Q8N6V9 391 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 FATE1Q969F0 183 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SPDL1Q96EA4 605 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SEPT5Q99719 369 aaPredicted RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 C1QTNF1Q9BXJ1 281 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 CRISPLD1Q9H336 500 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 FAM96AQ9H5X1 160 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 RNPEPL1Q9HAU8 725 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 NT5MQ9NPB1 228 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 TREX1Q9NSU2 369 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 PCDHB12Q9Y5F1 795 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 LIN7AO14910 233 aaPredicted RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 PHGDHO43175 533 aaKnown RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 PAMP19021 973 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SLC11A1P49279 550 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SLC10A7Q0GE19 358 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms