RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 CUL9Q8IWT3 2517 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 MCF2LO15068 1137 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 CEP104O60308 925 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 APBB3O95704 486 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 FGGP02679 453 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 PRLRP16471 622 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 TCP1P17987 556 aaKnown RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 NDUFV2P19404 249 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 MMP13P45452 471 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 RGRP47804 291 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 CCNHP51946 323 aaPredicted RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 RHOAP61586 193 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 SLC45A4Q5BKX6 768 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 CARD16Q5EG05 197 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 MARC1Q5VT66 337 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 ALG1LQ6GMV1 187 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 DPY19L3Q6ZPD9 716 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 ZC3H18Q86VM9 953 aaKnown RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 STK40Q8N2I9 435 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 PGBD5Q8N414 524 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 TSEN2Q8NCE0 465 aaKnown RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 MDGA1Q8NFP4 955 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 TFB1MQ8WVM0 346 aaKnown RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 ERLEC1Q96DZ1 483 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 CCDC114Q96M63 670 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 GDAP1L1Q96MZ0 367 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 FAM118BQ9BPY3 351 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 MGME1Q9BQP7 344 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 CINPQ9BW66 212 aaPredicted RBP16.3■□□□□ 0.2
LRRC28-202ENST00000331450 SEPT3Q9UH03 358 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 EBF1Q9UH73 591 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 AMACRQ9UHK6 382 aa16.3■□□□□ 0.2
LRRC28-202ENST00000331450 CTAGE9A4FU28 777 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 KCNK1O00180 336 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 IGSF6O95976 241 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 CTSLP07711 333 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 RBP3P10745 1247 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 CCNB1P14635 433 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 CR2P20023 1033 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 HSPA9P38646 679 aaKnown RBP16.29■□□□□ 0.2
LRRC28-202ENST00000331450 CSNK1DP48730 415 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 RENBPP51606 427 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 EIF3EP60228 445 aaKnown RBP16.29■□□□□ 0.2
LRRC28-202ENST00000331450 SNRPD1P62314 119 aaKnown RBP16.29■□□□□ 0.2
LRRC28-202ENST00000331450 AP1B1Q10567 949 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 ZBTB17Q13105 803 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
LRRC28-202ENST00000331450 ANO7Q6IWH7 933 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 TSSK4Q6SA08 328 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 B4GALNT4Q76KP1 1039 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 CHST14Q8NCH0 376 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 NSMCE1Q8WV22 266 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 OR8D1Q8WZ84 308 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 NELL1Q92832 810 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 EXOC2Q96KP1 924 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 SLC6A17Q9H1V8 727 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 WASF2Q9Y6W5 498 aa16.29■□□□□ 0.2
LRRC28-202ENST00000331450 CCDC163A0A0D9SF12 145 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 MTSS1O43312 755 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 BNIP3LO60238 219 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 RECQLP46063 649 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 RPS14P62263 151 aaKnown RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 NSUN2Q08J23 767 aaKnown RBP eCLIP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 DMWDQ09019 674 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 WASHC5Q12768 1159 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 ZNF235Q14590 738 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 ANGPT1Q15389 498 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 ZNF776Q68DI1 518 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 SYT10Q6XYQ8 523 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 TMPRSS6Q8IU80 811 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 CDKL3Q8IVW4 592 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 CNTD1Q8N815 330 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 ACTRT1Q8TDG2 376 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 HMGB4Q8WW32 186 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 MAIP1Q8WWC4 291 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 ATG4AQ8WYN0 398 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 MS4A14Q96JA4 679 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 C16orf45Q96MC5 204 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-202ENST00000331450 PPM1HQ9ULR3 514 aa16.28■□□□□ 0.2
LRRC28-202ENST00000331450 CEP192Q8TEP8 1941 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 BCLAF3A2AJT9 711 aaKnown RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 H7C0C1 242 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 RNF103O00237 685 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 PGRMC1O00264 195 aaKnown RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 ZNF185O15231 689 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 LIASO43766 372 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 ALDH1A2O94788 518 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 HLA-DQB2P05538 268 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 PTPN3P26045 913 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 RBL1P28749 1068 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 CHRNA3P32297 505 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 ATP5OP48047 213 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 OASLQ15646 514 aaKnown RBP16.27■□□□□ 0.2
LRRC28-202ENST00000331450 CST6Q15828 149 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 LONRF2Q1L5Z9 754 aa16.27■□□□□ 0.2
LRRC28-202ENST00000331450 MYLK3Q32MK0 819 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms