RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 NEK7Q8TDX7 302 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 PNPLA3Q9NST1 481 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 GABBR2O75899 941 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 DGAT1O75907 488 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CD151P48509 253 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TFAP2DQ7Z6R9 452 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 OR52L1Q8NGH7 329 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 NAT14Q8WUY8 206 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 PRAMEF33A0A0G2JMD5 474 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 PRAMEF10O60809 474 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 NAMPTP43490 491 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 GRAPQ13588 217 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 PDK2Q15119 407 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SCIMPQ6UWF3 145 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 RBM43Q6ZSC3 357 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 RHBGQ9H310 441 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 EXD2Q9NVH0 621 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 UBQLN1Q9UMX0 589 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 STARD13Q9Y3M8 1113 aa12.9□□□□□ -0.34
RAB11FIP1-202ENST00000330843 GMFGO60234 142 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SNAP91O60641 907 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 COX4I1P13073 169 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GP5P40197 560 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MAGEA8P43361 318 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 AFF1P51825 1210 aaKnown RBP12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 EMILIN2Q9BXX0 1053 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NOL11Q9H8H0 719 aaKnown RBP12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RAPGEFL1Q9UHV5 662 aa12.9□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ADGRL2O95490 1459 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MAGI2Q86UL8 1455 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DNMT1P26358 1616 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ANKDD1BA6NHY2 528 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 IL2P60568 153 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 BOLA3Q53S33 107 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DET1Q7L5Y6 550 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GPATCH1Q9BRR8 931 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 FRMD8P1Q9BZ68 369 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 TIPRLO75663 272 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 UNC5CO95185 931 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NR3C2P08235 984 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PRLRP16471 622 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PSME3P61289 254 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ALKBH2Q6NS38 261 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 KCTD5Q9NXV2 234 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 ULK1O75385 1050 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MAPK12P53778 367 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 OR56A4Q8NGH8 313 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SPAG4Q9NPE6 437 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MOXD2PA6NHM9 499 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SNRPB2P08579 225 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SSTP61278 116 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SRSF11Q05519 484 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 MTMR2Q13614 643 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PIK3R6Q5UE93 754 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SATL1Q86VE3 508 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 EIF1ADQ8N9N8 165 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PHF10Q8WUB8 498 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DCLK3Q9C098 648 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NMRAL1Q9HBL8 299 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 GRIP1Q9Y3R0 1128 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PTPN6P29350 595 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 VPS72Q15906 364 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CCNG2Q16589 344 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 HECTD3Q5T447 861 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 IGDCC4Q8TDY8 1250 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PIH1D2Q8WWB5 315 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 KAT5Q92993 513 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 Q96MT0 163 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SLC38A2Q96QD8 506 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 RACGAP1Q9H0H5 632 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 KCNK4Q9NYG8 393 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 PTCH1Q13635 1447 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 A0A075B6Q4 140 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CBX4O00257 560 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 SPANXN3Q5MJ09 141 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 DUS1LQ6P1R4 473 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 C1GALT1C1Q96EU7 318 aa12.89□□□□□ -0.35
RAB11FIP1-202ENST00000330843 NPAS2Q99743 824 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms