RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PPP1R26Q5T8A7 1209 aaPredicted RBP15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 PM20D1Q6GTS8 502 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 TCTN3Q6NUS6 607 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 BHLHA9Q7RTU4 235 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 PIGZQ86VD9 579 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 CACNA2D3Q8IZS8 1091 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 NDRG1Q92597 394 aaKnown RBP15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 EDEM1Q92611 657 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 TBATAQ96M53 351 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 GDPD2Q9HCC8 539 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 SIRPGQ9P1W8 387 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 HOOK1Q9UJC3 728 aaKnown RBP15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 NAALADL1Q9UQQ1 740 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 DAAM1Q9Y4D1 1078 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 CSMD2Q7Z408 3487 aa15.13■□□□□ 0.01
CTHRC1-201ENST00000330295 RAD51BO15315 384 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 IGLV3-27P01718 113 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 OAS2P29728 719 aaKnown RBP15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 HOXD13P35453 343 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 CASP4P49662 377 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 NUMBP49757 651 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 CYP2J2P51589 502 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 TKTL1P51854 596 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 CCDC15Q0P6D6 951 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 EIF2S3LQ2VIR3 472 aaKnown RBP15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 NADSYN1Q6IA69 706 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 ASB18Q6ZVZ8 466 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 TIPARPQ7Z3E1 657 aaKnown RBP15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 CCNJLQ8IV13 435 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 UNC45BQ8IWX7 931 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 PHACTR4Q8IZ21 702 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 CFAP52Q8N1V2 620 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 ZNF507Q8TCN5 953 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 MARVELD3Q96A59 401 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 SLC17A9Q9BYT1 436 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 ULBP1Q9BZM6 244 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 CLPBQ9H078 707 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 GGT7Q9UJ14 662 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 RNF215Q9Y6U7 377 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 ZNF106Q9H2Y7 1883 aaKnown RBP15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 SPG11Q96JI7 2443 aa15.12■□□□□ 0.01
CTHRC1-201ENST00000330295 SVILO95425 2214 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 ZNF202O95125 648 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 C4BPAP04003 597 aaKnown RBP15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 CCL4P13236 92 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 TSHRP16473 764 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 SULT2A1Q06520 285 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 C16orf72Q14CZ0 275 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 SGSM1Q2NKQ1 1148 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 ACCSLQ4AC99 568 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 PHF19Q5T6S3 580 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 BSPRYQ5W0U4 402 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 GRAMD1CQ8IYS0 662 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 XXYLT1Q8NBI6 393 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 PDCD6IPQ8WUM4 868 aaKnown RBP15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 AZIN2Q96A70 460 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 TCTN2Q96GX1 697 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 UBXN6Q9BZV1 441 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 SLC13A1Q9BZW2 595 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 SLC39A2Q9NP94 309 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 AGPAT3Q9NRZ7 376 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 AKAP7Q9P0M2 348 aaPredicted RBP15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 ERRFI1Q9UJM3 462 aaPredicted RBP15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 PCDHGA3Q9Y5H0 932 aa15.11■□□□□ 0.01
CTHRC1-201ENST00000330295 MKRN2OSH3BPM6 223 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 KPNA3O00505 521 aaPredicted RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 FPGTO14772 594 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 HNRNPRO43390 633 aaKnown RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 CASP1P29466 404 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 AP3M2P53677 418 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 KNOP1Q1ED39 458 aaKnown RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 DCAF6Q58WW2 860 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 MS4A13Q5J8X5 152 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 SPOPLQ6IQ16 392 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 Q6ZVU0 165 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 EPM2AIP1Q7L775 607 aaPredicted RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 CCDC13Q8IYE1 715 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 Q8N9G6 341 aaPredicted RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 OR6C4Q8NGE1 309 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 PCDH19Q8TAB3 1148 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 SCG3Q8WXD2 468 aaKnown RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 PMEPA1Q969W9 287 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 TAAR9Q96RI9 348 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 PNMA8BQ9ULN7 279 aaPredicted RBP15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 DOLKQ9UPQ8 538 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 DNHD1Q96M86 4753 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 AKAP9Q99996 3911 aa15.1■□□□□ 0.01
CTHRC1-201ENST00000330295 CLIC2O15247 247 aa15.09■□□□□ 0.01
CTHRC1-201ENST00000330295 ATP9BO43861 1147 aa15.09■□□□□ 0.01
CTHRC1-201ENST00000330295 BNIP3LO60238 219 aa15.09■□□□□ 0.01
CTHRC1-201ENST00000330295 RPN1P04843 607 aaKnown RBP15.09■□□□□ 0.01
CTHRC1-201ENST00000330295 CTSLP07711 333 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms