RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 GPR15P49685 360 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 MLLT6P55198 1093 aaPredicted RBP14.77□□□□□ -0.05
TPM3-206ENST00000330188 DSC1Q08554 894 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 CTBP1Q13363 440 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 SLC12A1Q13621 1099 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 NAA25Q14CX7 972 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 UGP2Q16851 508 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 SDHAF4Q5VUM1 108 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 ZYG11AQ6WRX3 759 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 RIPOR1Q6ZS17 1223 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 KIRREL3Q8IZU9 778 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 MAPK15Q8TD08 544 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 DTX3LQ8TDB6 740 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 PTCD2Q8WV60 388 aaKnown RBP14.77□□□□□ -0.05
TPM3-206ENST00000330188 FTHL17Q9BXU8 183 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 NOL6Q9H6R4 1146 aaKnown RBP14.77□□□□□ -0.05
TPM3-206ENST00000330188 BATF3Q9NR55 127 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 RGS18Q9NS28 235 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 NMRK1Q9NWW6 199 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 SCML2Q9UQR0 700 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 SQORQ9Y6N5 450 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 MIA3Q5JRA6 1907 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 THSD7BQ9C0I4 1608 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 DOCK4Q8N1I0 1966 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 A0A088AWK7 358 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 PMPCBO75439 489 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 COPAP53621 1224 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 SLC25A3Q00325 362 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 SLC9B1Q4ZJI4 515 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 CLLU1OSQ5K130 101 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 SNX30Q5VWJ9 437 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 LIPMQ5VYY2 423 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 MSANTD2Q6P1R3 559 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 RANBP10Q6VN20 620 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 LCA5Q86VQ0 697 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 LRRC49Q8IUZ0 686 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 MFSD6LQ8IWD5 586 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 CENPLQ8N0S6 344 aaPredicted RBP14.76□□□□□ -0.05
TPM3-206ENST00000330188 TDRD5Q8NAT2 981 aaKnown RBP14.76□□□□□ -0.05
TPM3-206ENST00000330188 KCTD4Q8WVF5 259 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 MOCOSQ96EN8 888 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 SLC39A13Q96H72 371 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 ZNF333Q96JL9 665 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 C1orf74Q96LT6 269 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 FSD1LQ9BXM9 530 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 TREX1Q9NSU2 369 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 IPO11Q9UI26 975 aaKnown RBP14.76□□□□□ -0.05
TPM3-206ENST00000330188 RUVBL2Q9Y230 463 aaKnown RBP14.76□□□□□ -0.05
TPM3-206ENST00000330188 TLR6Q9Y2C9 796 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 CASP8AP2Q9UKL3 1982 aa14.76□□□□□ -0.05
TPM3-206ENST00000330188 NVLO15381 856 aaKnown RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 CABYRO75952 493 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 OAZ2O95190 189 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 PEX11BO96011 259 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 CHRNGP07510 517 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ACADSP16219 412 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 NCF2P19878 526 aaPredicted RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 ABL2P42684 1182 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 SLC1A2P43004 574 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 CHRNA4P43681 627 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ACTR3P61158 418 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 CAP1Q01518 475 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TSNAXIP1Q2TAA8 658 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 CFAP157Q5JU67 520 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 GLB1LQ6UWU2 654 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 LRRC74BQ6ZQY2 392 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 MON1AQ86VX9 555 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ZNF683Q8IZ20 524 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 DCP1BQ8IZD4 617 aaKnown RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 NUP93Q8N1F7 819 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 PHTF2Q8N3S3 785 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 STYXQ8WUJ0 223 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 LINC01599Q8WXQ3 324 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 DNAJC9Q8WXX5 260 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TSNARE1Q96NA8 513 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 MAN1C1Q9NR34 630 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 FAM95CA0A1B0GW59 222 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TARM1B6A8C7 271 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TMEM189-UBE2V1I3L0A0 370 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 LUC7L3O95232 432 aaKnown RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 COL6A2P12110 1019 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 MPSTP25325 297 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 DNAJB1P25685 340 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 CDC25CP30307 473 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 GLRBP48167 497 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TM4SF4P48230 202 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 POLD2P49005 469 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 ZNF460Q14592 562 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 CNGA3Q16281 694 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 DDR2Q16832 855 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 C6orf163Q5TEZ5 329 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 TRIM68Q6AZZ1 485 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 KIAA0930Q6ICG6 404 aaPredicted RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 LRRC8EQ6NSJ5 796 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 KDELC1Q6UW63 502 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 KDELC2Q7Z4H8 507 aa14.75□□□□□ -0.05
TPM3-206ENST00000330188 MYLK4Q86YV6 388 aaPredicted RBP14.75□□□□□ -0.05
TPM3-206ENST00000330188 CEP97Q8IW35 865 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms