RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 REPS2Q8NFH8 660 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 JPH3Q8WXH2 748 aaPredicted RBP7.6□□□□□ -1.19
TRIM49-201ENST00000329758 TOP1MTQ969P6 601 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 ZNF668Q96K58 619 aaPredicted RBP7.6□□□□□ -1.19
TRIM49-201ENST00000329758 ZNF560Q96MR9 790 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 UHRF1Q96T88 793 aaPredicted RBP7.6□□□□□ -1.19
TRIM49-201ENST00000329758 KLF6Q99612 283 aaPredicted RBP7.6□□□□□ -1.19
TRIM49-201ENST00000329758 BCL7BQ9BQE9 202 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 KCNN2Q9H2S1 579 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 XPNPEP1Q9NQW7 623 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 C8orf4Q9NR00 106 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 FBXO8Q9NRD0 319 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 DMAC2Q9NW81 257 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 PKD2L2Q9NZM6 624 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 MARCOQ9UEW3 520 aaPredicted RBP7.6□□□□□ -1.19
TRIM49-201ENST00000329758 ZNF214Q9UL59 606 aaPredicted RBP7.6□□□□□ -1.19
TRIM49-201ENST00000329758 PLLPQ9Y342 182 aa7.6□□□□□ -1.19
TRIM49-201ENST00000329758 LCTP09848 1927 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 MYH9P35579 1960 aaKnown RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 PDPK1O15530 556 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 ZNF254O75437 659 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 RNASEH2AO75792 299 aaKnown RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 GSNP06396 782 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 CAPN1P07384 714 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 C7P10643 843 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 KITP10721 976 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 ATF7P17544 494 aaPredicted RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 NELFEP18615 380 aaKnown RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 XRCC1P18887 633 aaPredicted RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SSTR3P32745 418 aaPredicted RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SLC9A3P48764 834 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 RAD23AP54725 363 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 NME5P56597 212 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 ILF2Q12905 390 aaKnown RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 BFSP1Q12934 665 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 TARDBPQ13148 414 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 LLGL1Q15334 1064 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 TEDDM1Q5T9Z0 273 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 KCTD8Q6ZWB6 473 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 BTLAQ7Z6A9 289 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 TFAP2DQ7Z6R9 452 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 CTAGE3PQ8IX95 158 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 MFSD4AQ8N468 514 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 NPLOC4Q8TAT6 608 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SLC2A14Q8TDB8 520 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SLC44A1Q8WWI5 657 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SEMA4DQ92854 862 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 DUS3LQ96G46 650 aaKnown RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SERAC1Q96JX3 654 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 PI4K2AQ9BTU6 479 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 BEGAINQ9BUH8 593 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 STRA6Q9BX79 667 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 SCPEP1Q9HB40 452 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 UBE2TQ9NPD8 197 aaPredicted RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 CD320Q9NPF0 282 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 TCF7L2Q9NQB0 619 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 DUS2Q9NX74 493 aaKnown RBP7.59□□□□□ -1.19
TRIM49-201ENST00000329758 HSPBP1Q9NZL4 362 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 KCND2Q9NZV8 630 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 POLHQ9Y253 713 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 TCAF1Q9Y4C2 921 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 DNAH12Q6ZR08 3092 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 BRCA2P51587 3418 aa7.59□□□□□ -1.19
TRIM49-201ENST00000329758 E7ESA3 106 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 TRIM77I1YAP6 450 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 hCG_2039718K7EN88 272 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 SLC9A3R1O14745 358 aaPredicted RBP7.59□□□□□ -1.2
TRIM49-201ENST00000329758 PTTG1O95997 202 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 PRLP01236 227 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 INHBAP08476 426 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 ME2P23368 584 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 OR3A3P47888 321 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 HLCSP50747 726 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 WNT7BP56706 349 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 MRPS15P82914 257 aaKnown RBP7.59□□□□□ -1.2
TRIM49-201ENST00000329758 IFITM3Q01628 133 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 VAC14Q08AM6 782 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 MMRN1Q13201 1228 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 NAB1Q13506 487 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 MAPRE2Q15555 327 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 NFIL3Q16649 462 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 MTERF2Q49AM1 385 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 EPC2Q52LR7 807 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 SEZ6Q53EL9 994 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 FAM205BPQ63HN1 556 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 METTL2BQ6P1Q9 378 aaKnown RBP7.59□□□□□ -1.2
TRIM49-201ENST00000329758 SLC39A4Q6P5W5 647 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 FKBP9P1Q75LS8 142 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 PGAM4Q8N0Y7 254 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 ZCCHC7Q8N3Z6 543 aaKnown RBP7.59□□□□□ -1.2
TRIM49-201ENST00000329758 BEND7Q8N7W2 519 aaPredicted RBP7.59□□□□□ -1.2
TRIM49-201ENST00000329758 ANKFN1Q8N957 763 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 LMO3Q8TAP4 145 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 FIG4Q92562 907 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 DHX38Q92620 1227 aaKnown RBP7.59□□□□□ -1.2
TRIM49-201ENST00000329758 OMA1Q96E52 524 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 KLRG1Q96E93 195 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 BTBD6Q96KE9 485 aa7.59□□□□□ -1.2
TRIM49-201ENST00000329758 CEP170P1Q96L14 293 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms