RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 NUP205Q92621 2012 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 TSPAN17Q96FV3 270 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 TTPALQ9BTX7 342 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 CERS4Q9HA82 394 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 UBA2Q9UBT2 640 aaPredicted RBP16.25■□□□□ 0.19
SYNM-201ENST00000328642 TRMT6Q9UJA5 497 aaKnown RBP16.25■□□□□ 0.19
SYNM-201ENST00000328642 RNF103-CHMP3A0A140T963 221 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 ZCCHC18P0CG32 403 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 EPHB3P54753 998 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 HECTD3Q5T447 861 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 GRTP1Q5TC63 336 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 PIWIL2Q8TC59 973 aaKnown RBP16.25■□□□□ 0.19
SYNM-201ENST00000328642 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 HMCESQ96FZ2 354 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 TBATAQ96M53 351 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 HBEGFQ99075 208 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
SYNM-201ENST00000328642 UBE2OQ9C0C9 1292 aaKnown RBP16.25■□□□□ 0.19
SYNM-201ENST00000328642 GSTA4O15217 222 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 DDHD2O94830 711 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 PTPN4P29074 926 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 NPY2RP49146 381 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 SEMA5AQ13591 1074 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 LRRC73Q5JTD7 316 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 PCDH20Q8N6Y1 951 aaKnown RBP16.24■□□□□ 0.19
SYNM-201ENST00000328642 OR10T2Q8NGX3 314 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 CMTM5Q96DZ9 223 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 POMKQ9H5K3 350 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 SLC24A3Q9HC58 644 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 ZMYND8Q9ULU4 1186 aaPredicted RBP16.24■□□□□ 0.19
SYNM-201ENST00000328642 CDK16Q00536 496 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 SCUBE1Q8IWY4 988 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 TMLHEQ9NVH6 421 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 LMCD1Q9NZU5 365 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 J3KR12 359 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 KLHL2O95198 593 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 BIRC2Q13490 618 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 PCID2Q5JVF3 399 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 SNX32Q86XE0 403 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 ZSCAN18Q8TBC5 510 aaPredicted RBP16.24■□□□□ 0.19
SYNM-201ENST00000328642 RPL10LQ96L21 214 aaKnown RBP16.24■□□□□ 0.19
SYNM-201ENST00000328642 POLR1EQ9GZS1 481 aaKnown RBP16.24■□□□□ 0.19
SYNM-201ENST00000328642 SEMA4BQ9NPR2 832 aaPredicted RBP16.24■□□□□ 0.19
SYNM-201ENST00000328642 NCKIPSDQ9NZQ3 722 aa16.24■□□□□ 0.19
SYNM-201ENST00000328642 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 ANGPT2O15123 496 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 CNTN5O94779 1100 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 GRIA4P48058 902 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 POU4F1Q01851 419 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 ELAVL2Q12926 359 aaKnown RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 CYTH1Q15438 398 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 MFN1Q8IWA4 741 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 PYDC1Q8WXC3 89 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 ZNF778Q96MU6 729 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 MRPL1Q9BYD6 325 aaKnown RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 NENFQ9UMX5 172 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 TBL1XO60907 577 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 SELPP16109 830 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 TFEBP19484 476 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 PPARGP37231 505 aaPredicted RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 IRF9Q00978 393 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 SLC10A7Q0GE19 358 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 KRT80Q6KB66 452 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 DNAJC14Q6Y2X3 702 aaPredicted RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 RPS27LQ71UM5 84 aaKnown RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 C14orf80Q86SX3 495 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 NXNL1Q96CM4 212 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 PLLPQ9Y342 182 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 SLC4A7Q9Y6M7 1214 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 AP3B1O00203 1094 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 UNC5CO95185 931 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 CKBP12277 381 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 ARHGEF7Q14155 803 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 CAPRIN1Q14444 709 aaKnown RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 SPRED3Q2MJR0 410 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 FSTL4Q6MZW2 842 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 DRICH1Q6PGQ1 229 aaPredicted RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 NAPRTQ6XQN6 538 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 LRRTM3Q86VH5 581 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 LZTR1Q8N653 840 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 EBF4Q9BQW3 602 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
SYNM-201ENST00000328642 STARD13Q9Y3M8 1113 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
SYNM-201ENST00000328642 HEATR9A2RTY3 570 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 EME2A4GXA9 379 aaPredicted RBP16.22■□□□□ 0.19
SYNM-201ENST00000328642 FKTNO75072 461 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 FSBPO95073 299 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 MPSTP25325 297 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 TUFMP49411 452 aaKnown RBP16.22■□□□□ 0.19
SYNM-201ENST00000328642 TLE2Q04725 743 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 ZBTB17Q13105 803 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 CYP2R1Q6VVX0 501 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 CDHR3Q6ZTQ4 885 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 DCUN1D1Q96GG9 259 aa16.22■□□□□ 0.19
SYNM-201ENST00000328642 USP29Q9HBJ7 922 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms