RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PTCD2Q8WV60 388 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 DDX50Q9BQ39 737 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PDFQ9HBH1 243 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 MRM3Q9HC36 420 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 VPS45Q9NRW7 570 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 AGO1Q9UL18 857 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 ANKRD65E5RJM6 399 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 TPP1O14773 563 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 CLDN11O75508 207 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 MMP2P08253 660 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 MBL2P11226 248 aaPredicted RBP15.15■□□□□ 0.02
TPM3-205ENST00000328159 CRHR1P34998 444 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 CHRNA4P43681 627 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ADGRF1Q5T601 910 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 PDPK2PQ6A1A2 396 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 CHST9Q7L1S5 443 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 STRA8Q7Z7C7 330 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ZNF778Q96MU6 729 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ZNF599Q96NL3 588 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 AGAP2Q99490 1192 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 RBBP8Q99708 897 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ATXN3LQ9H3M9 355 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 IL21Q9HBE4 155 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ARNT2Q9HBZ2 717 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 TRPC7Q9HCX4 862 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 ATP13A1Q9HD20 1204 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 PHTF1Q9UMS5 762 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 STARD13Q9Y3M8 1113 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 TCAF1Q9Y4C2 921 aa15.15■□□□□ 0.02
TPM3-205ENST00000328159 A0A0D9SEW6 157 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 TGM5O43548 720 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 EDF1O60869 148 aaKnown RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 ALDOAP04075 364 aaKnown RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 HOXD9P28356 352 aaPredicted RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 SPRP35270 261 aaPredicted RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 SERPINB4P48594 390 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 PDE1BQ01064 536 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 ZNF235Q14590 738 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 PABPC1LQ4VXU2 614 aaKnown RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 RNF187Q5TA31 235 aaPredicted RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 CCDC121Q6ZUS5 278 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 HERC6Q8IVU3 1022 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 SLC25A41Q8N5S1 370 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 OTUD6BQ8N6M0 293 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 KLHL23Q8NBE8 558 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 OR7D4Q8NG98 312 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 TADA1Q96BN2 335 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 ZFRQ96KR1 1074 aaKnown RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 ZBED2Q9BTP6 218 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 MANSC1Q9H8J5 431 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 ALG13Q9NP73 1137 aaKnown RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 SLCO1B3Q9NPD5 702 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 IARS2Q9NSE4 1012 aaKnown RBP15.14■□□□□ 0.01
TPM3-205ENST00000328159 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 ASB3Q9Y575 518 aa15.14■□□□□ 0.01
TPM3-205ENST00000328159 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 A0A1B0GVM2 712 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 TCAF2A6NFQ2 919 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 TSPAN3O60637 253 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 CXCL14O95715 111 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 RHOCP08134 193 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 SGSHP51688 502 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 LIMK2P53671 638 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 CSE1LP55060 971 aaKnown RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 CORO7P57737 925 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 SMAD3P84022 425 aaKnown RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 FPGSQ05932 587 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 ZNF177Q13360 481 aaPredicted RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 IHHQ14623 411 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 ARMC3Q5W041 872 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 IL31Q6EBC2 164 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 OR52K2Q8NGK3 314 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 BADQ92934 168 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 CLP1Q92989 425 aaKnown RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 CYP2S1Q96SQ9 504 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 POLR1EQ9GZS1 481 aaKnown RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 NSMCE4AQ9NXX6 385 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 PRKAG3Q9UGI9 489 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 STOML2Q9UJZ1 356 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 ARL2BPQ9Y2Y0 163 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 INSL6Q9Y581 213 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 DENND4CQ5VZ89 1909 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 ILVBLA1L0T0 632 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 TTC24A2A3L6 582 aaPredicted RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 KDELR3O43731 214 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 LATS1O95835 1130 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 OXCT1P55809 520 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 DCLK2Q8N568 766 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 ARL14EPQ8N8R7 260 aaPredicted RBP15.13■□□□□ 0.01
TPM3-205ENST00000328159 ARMC2Q8NEN0 867 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 SEMA3CQ99985 751 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 SPON2Q9BUD6 331 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 ZMYND15Q9H091 742 aa15.13■□□□□ 0.01
TPM3-205ENST00000328159 PRKAG2Q9UGJ0 569 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms