RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 DHX9Q08211 1270 aaKnown RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 NR1H3Q13133 447 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 ZNF235Q14590 738 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 LBRQ14739 615 aaKnown RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 HIF1AQ16665 826 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 INO80DQ53TQ3 878 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 DNAJC21Q5F1R6 531 aaKnown RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 FYB2Q5VWT5 728 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 TMC3Q7Z5M5 1100 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 LINC00523Q86TU6 105 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 GSPT2Q8IYD1 628 aaKnown RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 NETO2Q8NC67 525 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 DEPDC1BQ8WUY9 529 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 ATP2A3Q93084 1043 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 LRRC39Q96DD0 335 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 XPO6Q96QU8 1125 aaKnown RBP18.34■□□□□ 0.53
SYNE4-201ENST00000324444 KXD1Q9BQD3 176 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 FEM1AQ9BSK4 669 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 BBS2Q9BXC9 721 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 GLOD4Q9HC38 313 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 VPS28Q9UK41 221 aa18.34■□□□□ 0.53
SYNE4-201ENST00000324444 PI15O43692 258 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 METTL18O95568 372 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 FAM153BP0C7A2 387 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 AOC1P19801 751 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 ACVRL1P37023 503 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 SGSHP51688 502 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 PMS2P54278 862 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 SULT2A1Q06520 285 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 ZBTB17Q13105 803 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 GPS2Q13227 327 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 CASP8Q14790 479 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 FAM153CQ494X1 144 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 ALS2CLQ60I27 953 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 ARHGAP36Q6ZRI8 547 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 YAF2Q8IY57 180 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 RBM15Q96T37 977 aaKnown RBP eCLIP18.33■□□□□ 0.53
SYNE4-201ENST00000324444 PHOX2BQ99453 314 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 POLR1EQ9GZS1 481 aaKnown RBP18.33■□□□□ 0.53
SYNE4-201ENST00000324444 SLC25A51Q9H1U9 297 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 LRRC40Q9H9A6 602 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 SLC2A4RGQ9NR83 387 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 VPS45Q9NRW7 570 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 FAM153AQ9UHL3 310 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 ATP8A1Q9Y2Q0 1164 aa18.33■□□□□ 0.53
SYNE4-201ENST00000324444 COL4A3Q01955 1670 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 A0A0D9SEW6 157 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 HEPACAM2A8MVW5 462 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 H0Y858 1186 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 J3KR12 359 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 SCAMP3O14828 347 aaKnown RBP18.32■□□□□ 0.52
SYNE4-201ENST00000324444 TP73O15350 636 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 ECI2O75521 394 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 TSHRP16473 764 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 PSMB4P28070 264 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 VIPR2P41587 438 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 SLC14A2Q15849 920 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 PREPLQ4J6C6 727 aaPredicted RBP18.32■□□□□ 0.52
SYNE4-201ENST00000324444 RALGPS1Q5JS13 557 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 ARMC3Q5W041 872 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 NAPEPLDQ6IQ20 393 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 CROCCP2Q86T23 111 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 CCDC25Q86WR0 208 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 MFSD6LQ8IWD5 586 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 OR7D4Q8NG98 312 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 LRRN4Q8WUT4 740 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 ELSPBP1Q96BH3 223 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 CINPQ9BW66 212 aaPredicted RBP18.32■□□□□ 0.52
SYNE4-201ENST00000324444 PDFQ9HBH1 243 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 ARHGEF3Q9NR81 526 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 FAM86C1Q9NVL1 165 aa18.32■□□□□ 0.52
SYNE4-201ENST00000324444 NEDD8-MDP1E9PL57 170 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 CBX4O00257 560 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 HOXC11O43248 304 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-201ENST00000324444 SUN1O94901 812 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 AP2A1O95782 977 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 PEX11BO96011 259 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 NFKB1P19838 968 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 NRLP54845 237 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 MPP3Q13368 585 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 LY6G5CQ5SRR4 150 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 CCNJLQ8IV13 435 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 KLHDC8BQ8IXV7 354 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 CNTD1Q8N815 330 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 ATOH1Q92858 354 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-201ENST00000324444 PSKH2Q96QS6 385 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 PABPC3Q9H361 631 aaKnown RBP18.31■□□□□ 0.52
SYNE4-201ENST00000324444 TBC1D17Q9HA65 648 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 OR51B4Q9Y5P0 310 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 WNT6Q9Y6F9 365 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 MYOFQ9NZM1 2061 aa18.31■□□□□ 0.52
SYNE4-201ENST00000324444 E7ESA3 106 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 ALOX15BO15296 676 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 ADH5P11766 374 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 TYRP14679 529 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 CSKP41240 450 aa18.3■□□□□ 0.52
SYNE4-201ENST00000324444 EIF3BP55884 814 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms