RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GSTT2P0CG29 244 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 GSTT2BP0CG30 244 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF235Q14590 738 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 HPS6Q86YV9 775 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4Z2PQ8N1L4 340 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 DEPDC4Q8N2C3 294 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CNTD1Q8N815 330 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 MYLPFQ96A32 169 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 KATNAL1Q9BW62 490 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 REEP1Q9H902 201 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CHST7Q9NS84 486 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CORO2BQ9UQ03 480 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PCDHA10Q9Y5I2 948 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 C2orf71A6NGG8 1288 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 MARSP56192 900 aaKnown RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 DPYSL3Q14195 570 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 DLGAP5Q15398 846 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 MOGQ16653 247 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 VWA5B1Q5TIE3 1220 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 FNDC5Q8NAU1 212 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 IPMKQ8NFU5 416 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TNIP3Q96KP6 325 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PANX3Q96QZ0 392 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CIB1Q99828 191 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 MINPP1Q9UNW1 487 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 A0A096LPK6 155 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PPEF1O14829 653 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 UMPSP11172 480 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PRDX5P30044 214 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 MARCKSL1P49006 195 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 OR52E8Q6IFG1 317 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ZCCHC8Q6NZY4 707 aaKnown RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 P2RY8Q86VZ1 359 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 FAM228AQ86W67 206 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ABRAQ8N0Z2 381 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CENPSQ8N2Z9 138 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 RNFT2Q96EX2 444 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 SLC47A1Q96FL8 570 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TMEM59LQ9UK28 342 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PPM1HQ9ULR3 514 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 RAP2CQ9Y3L5 183 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PEX16Q9Y5Y5 336 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ADAMTSL3P82987 1691 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TRAFD1O14545 582 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 YES1P07947 543 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TSPAN19P0C672 248 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 AKT1P31749 480 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PRIM2P49643 509 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 JAM2P57087 298 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 DLG1Q12959 904 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF549Q6P9A3 640 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SYCE2Q6PIF2 218 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ADGRD1Q6QNK2 874 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CACTIN-AS1Q8N1I8 211 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 URGCPQ8TCY9 931 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 VMP1Q96GC9 406 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 MARK4Q96L34 752 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 POMKQ9H5K3 350 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FAM217BQ9NTX9 383 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ERAP1Q9NZ08 941 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SLC17A7Q9P2U7 560 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FAM95CA0A1B0GW59 222 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TTC34A8MYJ7 566 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 HDAC3O15379 428 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SEPHS1P49903 392 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SPDYE7PQ495Y7 208 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ARHGAP36Q6ZRI8 547 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 IRF2BP2Q7Z5L9 587 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 GATAD2AQ86YP4 633 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PM20D2Q8IYS1 436 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CHCHD4Q8N4Q1 142 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SEMA4DQ92854 862 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PLA2G4CQ9UP65 541 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ZSCAN5BA6NJL1 495 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TIPRLO75663 272 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CYP2F1P24903 491 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 DCAF6Q58WW2 860 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CCNYL2Q5T2Q4 361 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 C10orf107Q8IVU9 208 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FAM126BQ8IXS8 530 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CDYL2Q8N8U2 506 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ALG3Q92685 438 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PHF12Q96QT6 1004 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 MND1Q9BWT6 205 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FAIMQ9NVQ4 179 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 MAP3K20Q9NYL2 800 aaKnown RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 POMPQ9Y244 141 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 YLPM1P49750 1951 aaKnown RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ILVBLA1L0T0 632 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FAM47E-STBD1D6RA91 191 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 EPC2Q52LR7 807 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 RBM48Q5RL73 367 aaKnown RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 LRRC38Q5VT99 294 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PLET1Q6UQ28 207 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FRMD7Q6ZUT3 714 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TOP1MTQ969P6 601 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CENPNQ96H22 339 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 HOPXQ9BPY8 73 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms