RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 GUCY2DQ02846 1103 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 SEMA5AQ13591 1074 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 PTPRNQ16849 979 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 ERCC6LQ2NKX8 1250 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 SLC44A4Q53GD3 710 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 RALGPS1Q5JS13 557 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 PCGF5Q86SE9 256 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 PLPP6Q8IY26 295 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 IFT20Q8IY31 132 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 PGBD5Q8N414 524 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 PCDH20Q8N6Y1 951 aaKnown RBP13.82□□□□□ -0.2
PRPF18-201ENST00000320054 ATP11CQ8NB49 1132 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 TSEN2Q8NCE0 465 aaKnown RBP13.82□□□□□ -0.2
PRPF18-201ENST00000320054 POLR1EQ9GZS1 481 aaKnown RBP13.82□□□□□ -0.2
PRPF18-201ENST00000320054 SLC25A51Q9H1U9 297 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 ANKZF1Q9H8Y5 726 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 FAM114A2Q9NRY5 505 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 WHRNQ9P202 907 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 LHX3Q9UBR4 397 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 RSPH14Q9UHP6 348 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 ACTL7AQ9Y615 435 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
PRPF18-201ENST00000320054 ERI2A8K979 691 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 K7ERQ8 282 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 MUSKO15146 869 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 PSMD3O43242 534 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 SMAD6O43541 496 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 ANXA9O76027 345 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 GSRP00390 522 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 CR2P20023 1033 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 DRD1P21728 446 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 PSMB4P28070 264 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 RPL21P46778 160 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 RHOAP61586 193 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 ST8SIA6P61647 398 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 PRPSAP1Q14558 356 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 SLC14A2Q15849 920 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 TMEM196Q5HYL7 178 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 C22orf39Q6P5X5 142 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 TXNDC11Q6PKC3 985 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 ARRDC2Q8TBH0 407 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 KCNV2Q8TDN2 545 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 IMP4Q96G21 291 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 MYO19Q96H55 970 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 RPL10LQ96L21 214 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 NUDCD1Q96RS6 583 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 FAM129AQ9BZQ8 928 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 TRIM31Q9BZY9 425 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 ETNK1Q9HBU6 452 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 EPB41L5Q9HCM4 733 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 FBRSL1Q9HCM7 1045 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 RAB6BQ9NRW1 208 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 THAP10Q9P2Z0 257 aaPredicted RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 SLCO3A1Q9UIG8 710 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 TPX2Q9ULW0 747 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 PLA2G4CQ9UP65 541 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 FCF1Q9Y324 198 aaKnown RBP13.81□□□□□ -0.2
PRPF18-201ENST00000320054 SNX24Q9Y343 169 aa13.81□□□□□ -0.2
PRPF18-201ENST00000320054 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 K7EQS6 105 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 SMAPO00193 183 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 MAN2B1O00754 1011 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 ZNF821O75541 412 aaPredicted RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 SEC31AO94979 1220 aaKnown RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 TUBBP07437 444 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 TPSB2P20231 275 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 TNFRSF8P28908 595 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 MAPK8P45983 427 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 SNRPD1P62314 119 aaKnown RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 CDK16Q00536 496 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 CAV1Q03135 178 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 PRKCQQ04759 706 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 ITKQ08881 620 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 NIPAL4Q0D2K0 466 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 CALCOCO2Q13137 446 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 CUL1Q13616 776 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 PON2Q15165 354 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 TPSAB1Q15661 275 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 DLG2Q15700 870 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 MLF2Q15773 248 aaPredicted RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 DGKKQ5KSL6 1271 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 FAM182AQ5T1J6 154 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 IER5LQ5T953 404 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 RNASEH2BQ5TBB1 312 aaKnown RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 FSTL4Q6MZW2 842 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 HOOK3Q86VS8 718 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 PPIL6Q8IXY8 311 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 UBALD2Q8IYN6 164 aa13.8□□□□□ -0.2
PRPF18-201ENST00000320054 EIF1ADQ8N9N8 165 aaKnown RBP13.8□□□□□ -0.2
PRPF18-201ENST00000320054 FRS2Q8WU20 508 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms