RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 SHKBP1Q8TBC3 707 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SMG7Q92540 1137 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 CDKL2Q92772 493 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 LRRC39Q96DD0 335 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 MFSD3Q96ES6 412 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 FCRL5Q96RD9 977 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 CHRAC1Q9NRG0 131 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 C20orf96Q9NUD7 363 aaPredicted RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 DNMT3BQ9UBC3 853 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 LZTS1Q9Y250 596 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 CCL26Q9Y258 94 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 FNDC3AQ9Y2H6 1198 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 MRPS23Q9Y3D9 190 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 HCFC2Q9Y5Z7 792 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 IQANK1A0A1B0GTG1 560 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 TRIM49D1C9J1S8 452 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 BUD23O43709 281 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 CYBBP04839 570 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 VIMP08670 466 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 MLNP12872 115 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 PGAM1P18669 254 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 KRT4P19013 534 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SP100P23497 879 aaPredicted RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 GCAP28676 217 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 WEE1P30291 646 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 CSKP41240 450 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 TMPRSS15P98073 1019 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 NIPAL4Q0D2K0 466 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 CAMK1Q14012 370 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 CRYMQ14894 314 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 FSCBQ5H9T9 825 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 LINC00523Q86TU6 105 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 RIBC1Q8N443 379 aaPredicted RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 GORASP1Q9BQQ3 440 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 TM6SF2Q9BZW4 377 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 MAGEH1Q9H213 219 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SLC28A3Q9HAS3 691 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SMYD2Q9NRG4 433 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ZFATQ9P243 1243 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SLC24A2Q9UI40 661 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 MSRAQ9UJ68 235 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 WDR91A4D1P6 747 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ERI2A8K979 691 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 PRAMEF11O60813 436 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 PRKCGP05129 697 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 RB1P06400 928 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 NMBRP28336 390 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 UBE3AQ05086 875 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ZNF33AQ06730 810 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 GALNT3Q14435 633 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SLC5A9Q2M3M2 681 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 HSP90AA5PQ58FG0 334 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ACBD5Q5T8D3 534 aaPredicted RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 LGSNQ5TDP6 509 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 AFMIDQ63HM1 303 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SLC26A11Q86WA9 606 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 CMTM8Q8IZV2 173 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.53□□□□□ -1.68
PATJ-202ENST00000316485 PPHLN1Q8NEY8 458 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 OR6K2Q8NGY2 324 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 WFDC5Q8TCV5 224 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 BLOC1S5Q8TDH9 187 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 BCAS4Q8TDM0 211 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ADAMTS19Q8TE59 1207 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 RMDN1Q96DB5 314 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ABHD8Q96I13 439 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 ZFRQ96KR1 1074 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 ZNF778Q96MU6 729 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 SLC13A1Q9BZW2 595 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 PHACTR1Q9C0D0 580 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 POLR1EQ9GZS1 481 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 IQCGQ9H095 443 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 SLC25A51Q9H1U9 297 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 C12orf65Q9H3J6 166 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 CNOT10Q9H9A5 744 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 CASS4Q9NQ75 786 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 IARS2Q9NSE4 1012 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 MAFFQ9ULX9 164 aa4.53□□□□□ -1.68
PATJ-202ENST00000316485 FCF1Q9Y324 198 aaKnown RBP4.53□□□□□ -1.68
PATJ-202ENST00000316485 NEDD8-MDP1E9PL57 170 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 CCL22O00626 93 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 NDUFAB1O14561 156 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 MUSKO15146 869 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 KRT37O76014 449 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 LUC7L3O95232 432 aaKnown RBP4.52□□□□□ -1.69
PATJ-202ENST00000316485 TSHRP16473 764 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 LSP1P33241 339 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 NPY2RP49146 381 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 RHOAP61586 193 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 IRX4P78413 519 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 SKOR1P84550 965 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 PDE1BQ01064 536 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 ZKSCAN8Q15776 578 aaPredicted RBP4.52□□□□□ -1.69
PATJ-202ENST00000316485 ACCSLQ4AC99 568 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 RARS2Q5T160 578 aaKnown RBP4.52□□□□□ -1.69
PATJ-202ENST00000316485 ARTNQ5T4W7 220 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 HHATQ5VTY9 493 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 MAMSTRQ6ZN01 415 aa4.52□□□□□ -1.69
PATJ-202ENST00000316485 MICALCLQ6ZW33 695 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms