RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 KCNA10Q16322 511 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ATAD1Q8NBU5 361 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 SCAMP5Q8TAC9 235 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 OLFM3Q96PB7 478 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 SEMA3CQ99985 751 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 SYTL2Q9HCH5 934 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 LY75O60449 1722 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 TPST1O60507 370 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 MYL4P12829 197 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 NFKBIAP25963 317 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 EPHA3P29320 983 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 NNMTP40261 264 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 KCNK10P57789 538 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 PSMD5Q16401 504 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 POTEHQ6S545 545 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 MARK2Q7KZI7 788 aaKnown RBP13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ANKRD27Q96NW4 1050 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 CDRT15Q96T59 188 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 TMEM216Q9P0N5 145 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 RHOAP61586 193 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 IFNLR1Q8IU57 520 aaPredicted RBP13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ZBTB42B2RXF5 422 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 SCAMP3O14828 347 aaKnown RBP13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 HDAC3O15379 428 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 TMED1Q13445 227 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 RIPOR1Q6ZS17 1223 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 AGAP2Q99490 1192 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 RBBP8Q99708 897 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ALG9Q9H6U8 611 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ARHGEF3Q9NR81 526 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 PRKAG2Q9UGJ0 569 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 CRLS1Q9UJA2 301 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 LRCH1Q9Y2L9 728 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
PCDHB9-201ENST00000316105 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 PIRO00625 290 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 NRP1O14786 923 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 CABYRO75952 493 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 GLUD2P49448 558 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 LIMK2P53671 638 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 INSCQ1MX18 579 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 PKN3Q6P5Z2 889 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 USP29Q9HBJ7 922 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 GID8Q9NWU2 228 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 CCDC167Q9P0B6 97 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 IGSF9Q9P2J2 1179 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 UBA2Q9UBT2 640 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 FAF1Q9UNN5 650 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 A0A087X1B8 175 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 NR5A2O00482 541 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 E2F6O75461 281 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 USP1O94782 785 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 AKT1P31749 480 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 PKNOX1P55347 436 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 SGO1Q5FBB7 561 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 LIPMQ5VYY2 423 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 IRGQQ8WZA9 623 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 DENND2DQ9H6A0 471 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 EIF2B3Q9NR50 452 aaKnown RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 RIC8BQ9NVN3 520 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 TYROBPO43914 113 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 PITX1P78337 314 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 SOX4Q06945 474 aaPredicted RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 GRM3Q14832 879 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 CCDC142Q17RM4 750 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 LRRC49Q8IUZ0 686 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 RBM15BQ8NDT2 890 aaKnown RBP13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 RAP2CQ9Y3L5 183 aa13.58□□□□□ -0.24
PCDHB9-201ENST00000316105 LTA4HP09960 611 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 NMBRP28336 390 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 VWA5B1Q5TIE3 1220 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 GLT6D1Q7Z4J2 308 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ZNF212Q9UDV6 495 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 SEPT3Q9UH03 358 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 PLA2G4CQ9UP65 541 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 V9GYQ6 96 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 COX4I1P13073 169 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ATP5F1P24539 256 aaPredicted RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ATP5C1P36542 298 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 FASTKQ14296 549 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 DLG2Q15700 870 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 AARS2Q5JTZ9 985 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 LDLRAD1Q5T700 205 aa13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 CAND1Q86VP6 1230 aaKnown RBP13.57□□□□□ -0.24
PCDHB9-201ENST00000316105 ARFGAP1Q8N6T3 406 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms