RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 DHDDSQ86SQ9 333 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 LRRTM3Q86VH5 581 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 RAET1EQ8TD07 263 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 BTN2A3PQ96KV6 586 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 RUFY1Q96T51 708 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 KLF6Q99612 283 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 OLFM1Q99784 485 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 UBE2OQ9C0C9 1292 aaKnown RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 SNX15Q9NRS6 342 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 AREL1O15033 823 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 F7P08709 466 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 BMP1P13497 986 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 VASPP50552 380 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 ROR2Q01974 943 aaKnown RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 RCN1Q15293 331 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 KIZQ2M2Z5 673 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 PPM1LQ5SGD2 360 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 LIN9Q5TKA1 542 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 FAM45BPQ6NSW5 357 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 CNSTQ6PJW8 725 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 TMEM184AQ6ZMB5 413 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 NECAB2Q7Z6G3 386 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 CPA6Q8N4T0 437 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 FAM45AQ8TCE6 357 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 MGARPQ8TDB4 240 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 HTR3CQ8WXA8 447 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 FGF11Q92914 225 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 TEKT5Q96M29 485 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 MTG1Q9BT17 334 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-201ENST00000315544 ANKRD60Q9BZ19 345 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 COG4Q9H9E3 785 aa7.96□□□□□ -1.14
CNOT4-201ENST00000315544 GOLGA6L7A0A1B0GV03 622 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 WDR27A2RRH5 827 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 MGEA5O60502 916 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 KLHL18O94889 574 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 PEX2P28328 305 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 GARSP41250 739 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 ADCYAP1R1P41586 468 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 ABCE1P61221 599 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 HABP4Q5JVS0 413 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 TXNDC5Q8NBS9 432 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 PDCD6IPQ8WUM4 868 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 TBC1D31Q96DN5 1066 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 BICD1Q96G01 975 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 C3orf30Q96M34 536 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 SMC6Q96SB8 1091 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 C19orf43Q9BQ61 176 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 BEGAINQ9BUH8 593 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 ELAC1Q9H777 363 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 XAB2Q9HCS7 855 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 UTP6Q9NYH9 597 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 LAMA1P25391 3075 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 LRRD1A4D1F6 860 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DRGXA6NNA5 263 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 GOLGA8SH3BPF8 625 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 GOLGA8MH3BSY2 632 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 LDB2O43679 373 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DLX3O60479 287 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 OPHN1O60890 802 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 LMNAP02545 664 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 CHRNGP07510 517 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 KRT5P13647 590 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 UQCRBP14927 111 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 MLLT10P55197 1068 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 BMPR2Q13873 1038 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 FSCN1Q16658 493 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 LAIR1Q6GTX8 287 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 MSANTD2Q6P1R3 559 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 EP400NLQ6ZTU2 488 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DPH6Q7L8W6 267 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 UBA3Q8TBC4 463 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 RDH11Q8TC12 318 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DNAJC9Q8WXX5 260 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 NDRG1Q92597 394 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 HAUS1Q96CS2 278 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 LRCH3Q96II8 777 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 CNDP2Q96KP4 475 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 GUCD1Q96NT3 240 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 CHST8Q9H2A9 424 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 NXF3Q9H4D5 531 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 IL23AQ9NPF7 189 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 GPATCH2LQ9NWQ4 482 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 BCCIPQ9P287 314 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 STOML2Q9UJZ1 356 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 AGAP14A8MT82 685 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 NBNO60934 754 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 FKBP6O75344 327 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 RNASEH2AO75792 299 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 ASGR1P07306 291 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 BMP2P12643 396 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 EPHA3P29320 983 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DSC1Q08554 894 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DLG2Q15700 870 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 DPY19L1Q2PZI1 675 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 FASTKD1Q53R41 847 aaKnown RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 PAOXQ6QHF9 649 aa7.95□□□□□ -1.14
CNOT4-201ENST00000315544 ZNF551Q7Z340 670 aaPredicted RBP7.95□□□□□ -1.14
CNOT4-201ENST00000315544 ANKFN1Q8N957 763 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms