RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 DHX33Q9H6R0 707 aaKnown RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 HEY2Q9UBP5 337 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 KLF15Q9UIH9 416 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 PHTF1Q9UMS5 762 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 A0A1W2PQ45 241 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 A0A1W2PQY0 241 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 H3BMM5 538 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 HS6ST1O60243 411 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 KELP23276 732 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 TTPAP49638 278 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 CIR1Q86X95 450 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 KATNAL2Q8IYT4 538 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 POMKQ9H5K3 350 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 LPOP22079 712 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 TLX1P31314 330 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 DGKEP52429 567 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 BRMS1LQ5PSV4 323 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 IYDQ6PHW0 289 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 IL27RAQ6UWB1 636 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 SLC9A9Q8IVB4 645 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 TPD52L3Q96J77 140 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 KLHL28Q9NXS3 571 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 FSHRP23945 695 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 GDI1P31150 447 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 PCID2Q5JVF3 399 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 CATSPER1Q8NEC5 780 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 NRP1O14786 923 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 ANXA5P08758 320 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 TAF8Q7Z7C8 310 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 KLK6Q92876 244 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 SEC16BQ96JE7 1060 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 CATSPER2Q96P56 530 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 POLMQ9NP87 494 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 EVLQ9UI08 416 aaPredicted RBP13.65□□□□□ -0.22
RFFL-201ENST00000315249 N6AMT1Q9Y5N5 214 aa13.65□□□□□ -0.22
RFFL-201ENST00000315249 ACSL4O60488 711 aa13.65□□□□□ -0.23
RFFL-201ENST00000315249 PECAM1P16284 738 aaPredicted RBP13.65□□□□□ -0.23
RFFL-201ENST00000315249 NOS3P29474 1203 aa13.65□□□□□ -0.23
RFFL-201ENST00000315249 TEAD4Q15561 434 aa13.65□□□□□ -0.23
RFFL-201ENST00000315249 CHST7Q9NS84 486 aa13.65□□□□□ -0.23
RFFL-201ENST00000315249 KLQ9UEF7 1012 aa13.65□□□□□ -0.23
RFFL-201ENST00000315249 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.23
RFFL-201ENST00000315249 ZFP37Q9Y6Q3 630 aaPredicted RBP13.65□□□□□ -0.23
RFFL-201ENST00000315249 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 CES2O00748 559 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 CLDN11O75508 207 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 GSNP06396 782 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 SKIV2L2P42285 1042 aaKnown RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 TRPC4APQ8TEL6 797 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 DPEP3Q9H4B8 488 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 ALG9Q9H6U8 611 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 ABHD14A-ACY1A0A1B0GW23 586 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 KPNA5O15131 536 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 LSP1P33241 339 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 TIE1P35590 1138 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 NRIP1P48552 1158 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 IRF8Q02556 426 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 EML3Q32P44 896 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 DPEP2Q9H4A9 486 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 ARHGEF4Q9NR80 690 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 RPL21P46778 160 aaKnown RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 SLC1A6P48664 564 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 STXBP5Q5T5C0 1151 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 AFTPHQ6ULP2 937 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 FAM120BQ96EK7 910 aaKnown RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 MYBPHLA2RUH7 354 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 HPCAL1P37235 193 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 AQP5P55064 265 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 NSL1Q96IY1 281 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 RPL10LQ96L21 214 aaKnown RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 IL1RAPL1Q9NZN1 696 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 PSME2Q9UL46 239 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 TCHHQ07283 1943 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 SLC38A8A6NNN8 435 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 TGFB1I1O43294 461 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 UMPSP11172 480 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 FMO1Q01740 532 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 PTPRNQ16849 979 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 DEPDC1Q5TB30 811 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 ZNF621Q6ZSS3 439 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 EXOSC4Q9NPD3 245 aaKnown RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 SOX13Q9UN79 622 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 EIF3HO15372 352 aaKnown RBP eCLIP13.64□□□□□ -0.23
RFFL-201ENST00000315249 LYPLA2O95372 231 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 ALAS2P22557 587 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 SF1Q15637 639 aaKnown RBP13.64□□□□□ -0.23
RFFL-201ENST00000315249 TRPM8Q7Z2W7 1104 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 RIN3Q8TB24 985 aa13.64□□□□□ -0.23
RFFL-201ENST00000315249 MYH6P13533 1939 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 GUCY1B2O75343 617 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms