RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 PPTC7Q8NI37 304 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 PBXIP1Q96AQ6 731 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 PPP1R14BQ96C90 147 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 DUS3LQ96G46 650 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 PPP1R36Q96LQ0 422 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 ZNF597Q96LX8 424 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 PPP1R2P1Q96PQ5 205 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 MRPL57Q9BQC6 102 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 SENP6Q9GZR1 1112 aaPredicted RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 MRPL46Q9H2W6 279 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 EML4Q9HC35 981 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 CHRAC1Q9NRG0 131 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 RRN3Q9NYV6 651 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 COX16Q9P0S2 106 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 ARHGEF37A1IGU5 675 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 HEATR9A2RTY3 570 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 TCAF2A6NFQ2 919 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 TARM1B6A8C7 271 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 TRMUO75648 421 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 PYGLP06737 847 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 SLC35E2BP0CK96 405 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 STMN1P16949 149 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 NPR3P17342 541 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 NFKB1P19838 968 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 USP46P62068 366 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 CCNA1P78396 465 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 RHDQ02161 417 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 GALNT2Q10471 571 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 PPIL2Q13356 520 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 DCTN2Q13561 401 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 GLRA4Q5JXX5 417 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 CNTN4Q8IWV2 1026 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 CHERPQ8IWX8 916 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 RBM12BQ8IXT5 1001 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 LSMEM2Q8N112 164 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 TRIML2Q8N7C3 387 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 CCNYL1Q8N7R7 359 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 KCTD4Q8WVF5 259 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 C18orf25Q96B23 403 aaPredicted RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 APBA2Q99767 749 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 CCT7Q99832 543 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 OCEL1Q9H607 264 aa14.03□□□□□ -0.16
MKS1-201ENST00000313863 AAR2Q9Y312 384 aaKnown RBP14.03□□□□□ -0.16
MKS1-201ENST00000313863 POLR2AP24928 1970 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 A0A0G2JLL6 359 aaPredicted RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 DLX3O60479 287 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 TRPA1O75762 1119 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 RNASEH2AO75792 299 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 F9P00740 461 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 SBK3P0C264 359 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 FAM163BP0C2L3 166 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 IMPDH2P12268 514 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 SAT1P21673 171 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 WARSP23381 471 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 LMO2P25791 158 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 ABCG1P45844 678 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 TUBA4AP68366 448 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 CDKL1Q00532 357 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 SEMA3BQ13214 749 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 OLIG2Q13516 323 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 MGAT5BQ3V5L5 792 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 PCID2Q5JVF3 399 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 TMEM198Q66K66 360 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 ALKAL1Q6UXT8 129 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 CATSPER4Q7RTX7 472 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 LIMS2Q7Z4I7 341 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 PRRT2Q7Z6L0 340 aaPredicted RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 ERI1Q8IV48 349 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 CCDC117Q8IWD4 279 aaPredicted RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 KDM1BQ8NB78 822 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 NETO2Q8NC67 525 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 B3GALNT2Q8NCR0 500 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 GABPB2Q8TAK5 448 aaPredicted RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 PTCD2Q8WV60 388 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 TEKT5Q96M29 485 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 KLHL32Q96NJ5 620 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 NPAS2Q99743 824 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 PNPLA3Q9NST1 481 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 PIGVQ9NUD9 493 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 CHCHD3Q9NX63 227 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 LMCD1Q9NZU5 365 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 XPR1Q9UBH6 696 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 RSL24D1Q9UHA3 163 aaKnown RBP14.02□□□□□ -0.16
MKS1-201ENST00000313863 SARDHQ9UL12 918 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 MYRFQ9Y2G1 1151 aa14.02□□□□□ -0.16
MKS1-201ENST00000313863 C9IYK1 514 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 SDHDO14521 159 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 PHGDHO43175 533 aaKnown RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 H6PDO95479 791 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 HSPA8P11142 646 aaKnown RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 ZNF26P17031 533 aaPredicted RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 ATP5F1P24539 256 aaPredicted RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 NMBRP28336 390 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 CD68P34810 354 aaPredicted RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 DPP6P42658 865 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 GLRBP48167 497 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms