RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DCLK2Q8N568 766 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 TERB1Q8NA31 727 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 FNIP1Q8TF40 1166 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 ALPK1Q96QP1 1244 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 VTA1Q9NP79 307 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 ZDHHC2Q9UIJ5 367 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 SLC27A5Q9Y2P5 690 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 LOXHD1Q8IVV2 1947 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
SPSB4-201ENST00000310546 PARP14Q460N5 1801 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 HEATR9A2RTY3 570 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 GRAP2O75791 330 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 MYF6P23409 242 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 GTF2A2P52657 109 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 DNASE1L3Q13609 305 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 PGM5Q15124 567 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 FAM117BQ6P1L5 589 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 APOL1O14791 398 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 CSE1LP55060 971 aaKnown RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 RFTN1Q14699 578 aaPredicted RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 MSTO1Q9BUK6 570 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 DGKBQ9Y6T7 804 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 DLGAP1O14490 977 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 CLOCKO15516 846 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 PAPSS1O43252 624 aaPredicted RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 PRPSAP2O60256 369 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 GMNNO75496 209 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 MYO1DO94832 1006 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 PLCL1Q15111 1095 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 SMUG1Q53HV7 270 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 FAM102AQ5T9C2 384 aaPredicted RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 XYLT1Q86Y38 959 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 CAMK1DQ8IU85 385 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 CPSF7Q8N684 471 aaKnown RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 CNTD1Q8N815 330 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 TCF12Q99081 682 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 TDRD1Q9BXT4 1180 aaKnown RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 SOX17Q9H6I2 414 aaPredicted RBP18.27■□□□□ 0.52
SPSB4-201ENST00000310546 SEPT3Q9UH03 358 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 RAP2CQ9Y3L5 183 aa18.27■□□□□ 0.52
SPSB4-201ENST00000310546 TMEM114B3SHH9 223 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 GRID2O43424 1007 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 CCNE2O96020 404 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 PGK2P07205 417 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 MGAT1P26572 445 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 OPRL1P41146 370 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 MAGEA6P43360 314 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 GRIA4P48058 902 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 NAGLUP54802 743 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 TPTEP56180 551 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 DPH6Q7L8W6 267 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 SNX31Q8N9S9 440 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 RTP4Q96DX8 246 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 CDCA5Q96FF9 252 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 PDCD2LQ9BRP1 358 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 NANOGQ9H9S0 305 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 TRPV5Q9NQA5 729 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 ASNSD1Q9NWL6 643 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 MTMR10Q9NXD2 777 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 GMPR2Q9P2T1 348 aaKnown RBP18.26■□□□□ 0.51
SPSB4-201ENST00000310546 B3GNT3Q9Y2A9 372 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 A0A096LPK6 155 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 S100BP04271 92 aaPredicted RBP18.26■□□□□ 0.51
SPSB4-201ENST00000310546 EEF1DP29692 281 aaKnown RBP18.26■□□□□ 0.51
SPSB4-201ENST00000310546 HOXD11P31277 338 aaPredicted RBP18.26■□□□□ 0.51
SPSB4-201ENST00000310546 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
SPSB4-201ENST00000310546 PDK2Q15119 407 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 FRA10AC1Q70Z53 315 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 MTMR12Q9C0I1 747 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 NMRAL1Q9HBL8 299 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 ANKEF1Q9NU02 776 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 ALDH1A2O94788 518 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 NR3C2P08235 984 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 GNL1P36915 607 aaPredicted RBP18.26■□□□□ 0.51
SPSB4-201ENST00000310546 TNK2Q07912 1038 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 TIGD2Q4W5G0 525 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 CGRRF1Q99675 332 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 ADPGKQ9BRR6 497 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 SLC39A3Q9BRY0 314 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 MROQ9BYG7 248 aa18.26■□□□□ 0.51
SPSB4-201ENST00000310546 TCRBV3S1A0A5B6 114 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 A6NL46 340 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 TMEM233B4DJY2 109 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 TK2O00142 265 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 B4GAT1O43505 415 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 ASS1P00966 412 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 SAT1P21673 171 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 HPCAL1P37235 193 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 GARSP41250 739 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 CAMK2BQ13554 666 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 ABRAXAS1Q6UWZ7 409 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 VASH1Q7L8A9 365 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 ANKFN1Q8N957 763 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 GABPB2Q8TAK5 448 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 TARS2Q9BW92 718 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 UNC93B1Q9H1C4 597 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms