RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GPALPP1Q8IXQ4 340 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 ACTL9Q8TC94 416 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 B3GALT6Q96L58 329 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 TMA7Q9Y2S6 64 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 BTN3A1O00481 513 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CYP27B1O15528 508 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF268Q14587 947 aaPredicted RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 TOMM20Q15388 145 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 RNPEPL1Q9HAU8 725 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CLK4Q9HAZ1 481 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 FAM196BA6NMK8 535 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 KMOO15229 486 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 FAM228BP0C875 321 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF75CPQ92670 426 aaPredicted RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 GSDMCQ9BYG8 508 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 POLR1EQ9GZS1 481 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 LMAN2LQ9H0V9 348 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 REM1O75628 298 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CES1P23141 567 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 DGCR6Q14129 220 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 ISCA1Q9BUE6 129 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 RPL22P35268 128 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 BMT2Q1RMZ1 405 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 TMPRSS11AQ6ZMR5 421 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 SLC47A2Q86VL8 602 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 ZSCAN18Q8TBC5 510 aaPredicted RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 KAT5Q92993 513 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 RBM7Q9Y580 266 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 H3BQF6 201 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 RBMXL2O75526 392 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 RGS1Q08116 209 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 MAGEE2Q8TD90 523 aaPredicted RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 FAM151AQ8WW52 585 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CDRT15Q96T59 188 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CIPCQ9C0C6 399 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CCNDBP1O95273 360 aa15.64■□□□□ 0.1
HCFC1-201ENST00000310441 MMP13P45452 471 aa15.64■□□□□ 0.1
HCFC1-201ENST00000310441 ENPEPQ07075 957 aa15.64■□□□□ 0.1
HCFC1-201ENST00000310441 HBS1LQ9Y450 684 aaKnown RBP15.64■□□□□ 0.1
HCFC1-201ENST00000310441 DCXO43602 365 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 MBTD1Q05BQ5 628 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 MTM1Q13496 603 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 NAA30Q147X3 362 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 AMHR2Q16671 573 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 DNERQ8NFT8 737 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 KCNN2Q9H2S1 579 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 POMKQ9H5K3 350 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ELL3Q9HB65 397 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 DMTF1Q9Y222 760 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 NFKB1P19838 968 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 C2orf49Q9BVC5 232 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 SIN3BO75182 1162 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 CATP04040 527 aaKnown RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 SNRPB2P08579 225 aaKnown RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 DENND5AQ6IQ26 1287 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 GRPEL2Q8TAA5 225 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 SPG21Q9NZD8 308 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 IFNA6P05013 189 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 NR2F6P10588 404 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 SLC6A2P23975 617 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 MAPKAPK3Q16644 382 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ARMC12Q5T9G4 340 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 PPIEQ9UNP9 301 aaKnown RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 MPZL2O60487 215 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 TSHRP16473 764 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 SREBF1P36956 1147 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF157P51786 506 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 USP46P62068 366 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 BCL2L1Q07817 233 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 FAM171BQ6P995 826 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ANKRD13AQ8IZ07 590 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 PIWIL2Q8TC59 973 aaKnown RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ATG4AQ8WYN0 398 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 PTGFRNQ9P2B2 879 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 MORF4L1Q9UBU8 362 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 LOC110117498-PIK3R3F6TDL0 507 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 GRIN3BO60391 1043 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ITGA3P26006 1051 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 RPL5P46777 297 aaKnown RBP15.64■□□□□ 0.09
HCFC1-201ENST00000310441 CCR3P51677 355 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 TKTL1P51854 596 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 ANXA8L1Q5VT79 327 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 PIK3R3Q92569 461 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 JMJD4Q9H9V9 463 aa15.64■□□□□ 0.09
HCFC1-201ENST00000310441 WDR27A2RRH5 827 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 THOP1P52888 689 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 ADIGQ0VDE8 80 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PTPRNQ16849 979 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 FAXCQ5TGI0 409 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF540Q8NDQ6 660 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 RUSC1Q9BVN2 902 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 OR10H2O60403 315 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PSMG1O95456 288 aa15.63■□□□□ 0.09
HCFC1-201ENST00000310441 PLEKP08567 350 aaPredicted RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 POLR2EP19388 210 aaKnown RBP15.63■□□□□ 0.09
HCFC1-201ENST00000310441 SLC12A8A0AV02 714 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms