RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PPIDQ08752 370 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TRIM71Q2Q1W2 868 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 FSCBQ5H9T9 825 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 NXNQ6DKJ4 435 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CYS1Q717R9 158 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 STK32CQ86UX6 486 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TRIML2Q8N7C3 387 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD42Q8N9B4 389 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 FBXO36Q8NEA4 188 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 NMD3Q96D46 503 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 SCYL1Q96KG9 808 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ASB2Q96Q27 587 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 RAD9AQ99638 391 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 GBA3Q9H227 469 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 SCUBE2Q9NQ36 999 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 DYRK4Q9NR20 520 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PTPRFP10586 1907 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 A0A1B0GVM2 712 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TCAF2A6NFQ2 919 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 MATN3O15232 486 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CHEK2O96017 543 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ASLP04424 464 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CYP2A6P11509 494 aaPredicted RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PTPN2P17706 415 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 GRK2P25098 689 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TKTP29401 623 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 SLC11A1P49279 550 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 AP2B1P63010 937 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 SEMA5AQ13591 1074 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 RAB33AQ14088 237 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TRIM60Q495X7 471 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 KIAA0408Q6ZU52 694 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 LIMS2Q7Z4I7 341 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ANKS1BQ7Z6G8 1248 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD13BQ86YJ7 626 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 RDH11Q8TC12 318 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 HASPINQ8TF76 798 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ATG4AQ8WYN0 398 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TTC17Q96AE7 1141 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 RTP4Q96DX8 246 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TMA16Q96EY4 203 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TRMT2BQ96GJ1 504 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TWNKQ96RR1 684 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 KCTD15Q96SI1 283 aaPredicted RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CCDC28BQ9BUN5 200 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TRIM54Q9BYV2 358 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CEP44Q9C0F1 390 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 DPEP3Q9H4B8 488 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ACSS3Q9H6R3 686 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 AGO3Q9H9G7 860 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 SYTL2Q9HCH5 934 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ACP6Q9NPH0 428 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 RBM22Q9NW64 420 aaKnown RBP eCLIP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 NINJ2Q9NZG7 142 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 KIAA1522Q9P206 1035 aaPredicted RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 LGALS13Q9UHV8 139 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PKP3Q9Y446 797 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CXorf51AA0A1B0GTR3 108 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 CCDC22O60826 627 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 PAGE1O75459 146 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 CIB2O75838 187 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 CXCL14O95715 111 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 EDN1P05305 212 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 CCDC166P0CW27 439 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ALADP13716 330 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ENDOUP21128 410 aaKnown RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 LMO2P25791 158 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 TYK2P29597 1187 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 OR1E1P30953 314 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 OR1D2P34982 312 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 PBX3P40426 434 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 RGS4P49798 205 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 IRAK1P51617 712 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 KLF1Q13351 362 aaPredicted RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 LRP8Q14114 963 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 KYNUQ16719 465 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 LONRF1Q17RB8 773 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 TTLL9Q3SXZ7 439 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 TEX44Q53QW1 395 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 KYAT3Q6YP21 454 aaKnown RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 RYBPQ8N488 228 aaPredicted RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 PIP4K2CQ8TBX8 421 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ANKRD49Q8WVL7 239 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ATXN2LQ8WWM7 1075 aaKnown RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 PTPRN2Q92932 1015 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 MAGEB10Q96LZ2 347 aaPredicted RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 PRPF18Q99633 342 aaKnown RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 MRM3Q9HC36 420 aaKnown RBP6.09□□□□□ -1.44
SEC22A-201ENST00000309934 CRTAC1Q9NQ79 661 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ARHGEF4Q9NR80 690 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 GID8Q9NWU2 228 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ARHGEF38Q9NXL2 777 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 TELO2Q9Y4R8 837 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 CDY1Q9Y6F8 540 aa6.09□□□□□ -1.44
SEC22A-201ENST00000309934 ARID2Q68CP9 1835 aa6.08□□□□□ -1.44
SEC22A-201ENST00000309934 A0A087X1B8 175 aa6.08□□□□□ -1.44
SEC22A-201ENST00000309934 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms