RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 OR1G1P47890 313 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 BFSP2Q13515 415 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 CSHL1Q14406 222 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 CCDC81Q6ZN84 652 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 TMC7Q7Z402 723 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 SARS2Q9NP81 518 aaKnown RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 KANSL3Q9P2N6 904 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 MYRFQ9Y2G1 1151 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 GABBR2O75899 941 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 CRTAMO95727 393 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 CHRNGP07510 517 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 PIK3R1P27986 724 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 SLC26A2P50443 739 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 MPP3Q13368 585 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 GK3PQ14409 553 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 TBCELQ5QJ74 424 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 PDZD4Q76G19 769 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 CIR1Q86X95 450 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 OFCC1Q8IZS5 231 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 TMCO5AQ8N6Q1 288 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 EXOC2Q96KP1 924 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 EBNA1BP2Q99848 306 aaKnown RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 C20orf27Q9GZN8 174 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 DNAI2Q9GZS0 605 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 FAM8A1Q9UBU6 413 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 OR12D3Q9UGF7 316 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 TMA7Q9Y2S6 64 aaKnown RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 NEMP2A6NFY4 417 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 ANGPT2O15123 496 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 INPP4BO15327 924 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 SPATA31D3P0C874 917 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 ARSAP15289 507 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 THOP1P52888 689 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 CBX3Q13185 183 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 LPIN1Q14693 890 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 PDK2Q15119 407 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 CCDC92Q53HC0 331 aaPredicted RBP12.83□□□□□ -0.35
RETREG3-201ENST00000309428 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 SLC9A4Q6AI14 798 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 GK5Q6ZS86 529 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 SPATA31D4Q6ZUB0 917 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 KIAA2013Q8IYS2 634 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 ZNF567Q8N184 647 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 DGCR6LQ9BY27 220 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 POLR1BQ9H9Y6 1135 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 POPDC2Q9HBU9 364 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 TMCO1Q9UM00 188 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 ST3GAL5Q9UNP4 418 aa12.83□□□□□ -0.35
RETREG3-201ENST00000309428 MYADML2A6NDP7 307 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 TK2O00142 265 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 DNAJA2O60884 412 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 CLIC3O95833 236 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 ATICP31939 592 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 SLC5A3P53794 718 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 C21orf59P57076 290 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 DDR2Q16832 855 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 C6orf10Q5SRN2 563 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 DSELQ8IZU8 1212 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 NCLNQ969V3 563 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 OR52B2Q96RD2 323 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 NMRAL1Q9HBL8 299 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 MID2Q9UJV3 735 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 VANGL2Q9ULK5 521 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 AP4S1Q9Y587 144 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 C17orf102A2RUQ5 167 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 PTGES3LE9PB15 166 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 DARSP14868 501 aaKnown RBP12.83□□□□□ -0.36
RETREG3-201ENST00000309428 IDH3AP50213 366 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 DMPKQ09013 629 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 WASHC5Q12768 1159 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 STILQ15468 1287 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 FAM83EQ2M2I3 478 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 SLC9B1Q4ZJI4 515 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 BTBD8Q5XKL5 378 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 ARHGAP17Q68EM7 881 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 GATA6Q92908 595 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 NRBF2Q96F24 287 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 MTG1Q9BT17 334 aaPredicted RBP12.83□□□□□ -0.36
RETREG3-201ENST00000309428 SPC25Q9HBM1 224 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 RSL24D1Q9UHA3 163 aaKnown RBP12.83□□□□□ -0.36
RETREG3-201ENST00000309428 PSMD13Q9UNM6 376 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 TEX264Q9Y6I9 313 aa12.83□□□□□ -0.36
RETREG3-201ENST00000309428 BHMG1C9JSJ3 638 aaPredicted RBP12.82□□□□□ -0.36
RETREG3-201ENST00000309428 CLOCKO15516 846 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 TBX18O95935 607 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 PRKCGP05129 697 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 ELNP15502 786 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 PSEN2P49810 448 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 DAB2P98082 770 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 DENND6AQ8IWF6 608 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 ACVR1CQ8NER5 493 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 CDC26Q8NHZ8 85 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 PLEKHG4BQ96PX9 1271 aa12.82□□□□□ -0.36
RETREG3-201ENST00000309428 FICDQ9BVA6 458 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms