RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CSTF1Q05048 431 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 PRKD1Q15139 912 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 KIAA1211LQ6NV74 962 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 LONP2Q86WA8 852 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 CDKL3Q8IVW4 592 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 TMIEQ8NEW7 156 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 OR2A12Q8NGT7 310 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 ACTL9Q8TC94 416 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 SIPA1Q96FS4 1042 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 MRGPRX1Q96LB2 322 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 HHIPQ96QV1 700 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 TUBGCP5Q96RT8 1024 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 NAPGQ99747 312 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 HEPHQ9BQS7 1158 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 SNX12Q9UMY4 172 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 FCF1Q9Y324 198 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 MUC22E2RYF6 1773 aaPredicted RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 KIF2AO00139 706 aaPredicted RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ENC1O14682 589 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ZNF821O75541 412 aaPredicted RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 STK10O94804 968 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 PEX11BO96011 259 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 DNTTP04053 509 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 TDGF1P13385 188 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 PECAM1P16284 738 aaPredicted RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 C5AR1P21730 350 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 COPAP53621 1224 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ETF1P62495 437 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 AP1B1Q10567 949 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 HEATR6Q6AI08 1181 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ANO7Q6IWH7 933 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ZC3H14Q6PJT7 736 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 USP30Q70CQ3 517 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 KBTBD6Q86V97 674 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 WDR5BQ86VZ2 330 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 TP53INP2Q8IXH6 220 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ZNF366Q8N895 744 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 HCAR2Q8TDS4 363 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 HMGB4Q8WW32 186 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 SPACA7Q96KW9 195 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 QKIQ96PU8 341 aaKnown RBP eCLIP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 MGME1Q9BQP7 344 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 CPEB1Q9BZB8 566 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 POLR1EQ9GZS1 481 aaKnown RBP18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 ZSCAN32Q9NX65 697 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 IL36AQ9UHA7 158 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 PCDHGA2Q9Y5H1 932 aa18.18■□□□□ 0.5
SSSCA1-201ENST00000309328 A0A1W2PQ67 120 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 CFAP69A5D8W1 941 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 ANTXRLA6NF34 631 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 AXIN1O15169 862 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 CEP104O60308 925 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 ATP1A1P05023 1023 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 GABRG2P18507 467 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 NDUFV2P19404 249 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 COL9A1P20849 921 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 OXTRP30559 389 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 CHRNA3P32297 505 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 NUMBP49757 651 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 CCNHP51946 323 aaPredicted RBP18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 OTUD4Q01804 1114 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 ADCY2Q08462 1091 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 SLC10A7Q0GE19 358 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 LLGL1Q15334 1064 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 CYTH1Q15438 398 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 MYLK3Q32MK0 819 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 USP39Q53GS9 565 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 ALG1LQ6GMV1 187 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 NPNTQ6UXI9 565 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 DPY19L3Q6ZPD9 716 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 MAML2Q8IZL2 1156 aaPredicted RBP18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 STK40Q8N2I9 435 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 PGBD3Q8N328 593 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 RASGEF1CQ8N431 466 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 MDGA1Q8NFP4 955 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 NELL1Q92832 810 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 OSBPL9Q96SU4 736 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 LGMNQ99538 433 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 TM6SF2Q9BZW4 377 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 MKRN2Q9H000 416 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 TNKS2Q9H2K2 1166 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 DYRK4Q9NR20 520 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 RNF14Q9UBS8 474 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 PPM1HQ9ULR3 514 aa18.17■□□□□ 0.5
SSSCA1-201ENST00000309328 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 H7C0C1 242 aa18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 PGRMC1O00264 195 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 MAP3K6O95382 1288 aa18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 FGGP02679 453 aa18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 ATP5OP48047 213 aa18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 EIF3EP60228 445 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 RPS14P62263 151 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 CST6Q15828 149 aa18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 PAPD7Q5XG87 772 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 AADACL2Q6P093 401 aa18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 ZC3H18Q86VM9 953 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-201ENST00000309328 RYBPQ8N488 228 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms