RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DCUN1D2Q6PH85 259 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 SPATS2Q86XZ4 545 aaKnown RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 TMEM145Q8NBT3 493 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 FNIP1Q8TF40 1166 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 SCNM1Q9BWG6 230 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 PREBQ9HCU5 417 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 PARVAQ9NVD7 372 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 GPATCH2LQ9NWQ4 482 aa20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 ZFR2Q9UPR6 939 aaKnown RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 COL5A1P20908 1838 aaPredicted RBP20.2■□□□□ 0.82
PDZRN3-202ENST00000308537 SPINT1O43278 529 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 KDELR3O43731 214 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 HYAL3O43820 417 aaPredicted RBP20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 EPHB2P29323 1055 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 MAT2AP31153 395 aaKnown RBP20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 GKP32189 559 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 ETFBP38117 255 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 KLHL30Q0D2K2 578 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 ERN2Q76MJ5 926 aaKnown RBP20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 RAB44Q7Z6P3 723 aaPredicted RBP20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 SLCO6A1Q86UG4 719 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 UMODL1-AS1Q8N2C9 162 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 SERAC1Q96JX3 654 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 CCDC114Q96M63 670 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 TM6SF2Q9BZW4 377 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 ZZEF1O43149 2961 aa20.19■□□□□ 0.82
PDZRN3-202ENST00000308537 ZFHX4Q86UP3 3567 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 FAM221BA6H8Z2 402 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 FLRT2O43155 660 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 NXPH1P58417 271 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 POLD3Q15054 466 aaPredicted RBP20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 ZNF284Q2VY69 593 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 TMEM259Q4ZIN3 620 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 LEKR1Q6ZMV7 388 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 SYN2Q92777 582 aaPredicted RBP20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 GATA6Q92908 595 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 HMCESQ96FZ2 354 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 ELF4Q99607 663 aaPredicted RBP20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 HEPHQ9BQS7 1158 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 SNRNP25Q9BV90 132 aaKnown RBP20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 LRRC19Q9H756 370 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 CNOT8Q9UFF9 292 aaKnown RBP20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 NENFQ9UMX5 172 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 DMTF1Q9Y222 760 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 CA5BQ9Y2D0 317 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 FARP1Q9Y4F1 1045 aaPredicted RBP20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 FREM2Q5SZK8 3169 aa20.18■□□□□ 0.82
PDZRN3-202ENST00000308537 KNTC1P50748 2209 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 GOLGA4Q13439 2230 aaKnown RBP20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 ANKRD62A6NC57 917 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 CREB3O43889 395 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 RNGTTO60942 597 aaKnown RBP20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 LRCH4O75427 683 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 GSRP00390 522 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 GYPCP04921 128 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 FTH1P19P0C7X4 201 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 PSMA2P25787 234 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 ITGB7P26010 798 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 CCT8P50990 548 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 UBASH3AP57075 661 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 IL9RQ01113 521 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 FGL2Q14314 439 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 NEK5Q6P3R8 708 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 PARS2Q7L3T8 475 aaKnown RBP20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 KANSL1Q7Z3B3 1105 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 PRPF39Q86UA1 669 aaKnown RBP20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 MFSD2AQ8NA29 543 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 OR6K2Q8NGY2 324 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 KCTD15Q96SI1 283 aaPredicted RBP20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 EPAS1Q99814 870 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 PDFQ9HBH1 243 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 AASDHPPTQ9NRN7 309 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 KLK13Q9UKR3 277 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 CAPN11Q9UMQ6 739 aa20.17■□□□□ 0.82
PDZRN3-202ENST00000308537 A0A1W2PQU0 124 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 C1QTNF9BB2RNN3 333 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 RASA4BC9J798 803 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 TLR4O00206 839 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 RASA4O43374 803 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 TMCC1O94876 653 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 C1QTNF9P0C862 333 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 ADRB3P13945 408 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 TCF4P15884 667 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 MIPP30301 263 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 NUDT1P36639 197 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 ABL2P42684 1182 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 YBEYP58557 167 aaPredicted RBP20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 SERINC3Q13530 473 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 AFMIDQ63HM1 303 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 SEL1L3Q68CR1 1132 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 ADAT2Q7Z6V5 191 aaKnown RBP20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 IQCHQ86VS3 1027 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 HORMAD1Q86X24 394 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 NETO2Q8NC67 525 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 OR2AP1Q8NGE2 309 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 SAP25Q8TEE9 199 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 SETD7Q8WTS6 366 aaKnown RBP20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 ADAMTS14Q8WXS8 1223 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 ZNF653Q96CK0 615 aa20.16■□□□□ 0.82
PDZRN3-202ENST00000308537 AP4E1Q9UPM8 1137 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms