RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
SSH3-201ENST00000308127 TRPC7Q9HCX4 862 aa16.83■□□□□ 0.28
SSH3-201ENST00000308127 C6orf203Q9P0P8 240 aaPredicted RBP16.83■□□□□ 0.28
SSH3-201ENST00000308127 SNX13Q9Y5W8 968 aa16.83■□□□□ 0.28
SSH3-201ENST00000308127 TCAF2A6NFQ2 919 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 MEIS3P2A8K0S8 358 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 FZD9O00144 591 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 PLOD2O00469 737 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 CHRNA4P43681 627 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 SCNN1BP51168 640 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 SNX16P57768 344 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 PDAP1Q13442 181 aaKnown RBP16.82■□□□□ 0.28
SSH3-201ENST00000308127 SEPT6Q14141 434 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 MAP7Q14244 749 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 TSTD2Q5T7W7 516 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 PAQR9Q6ZVX9 377 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 SREK1Q8WXA9 508 aaKnown RBP16.82■□□□□ 0.28
SSH3-201ENST00000308127 ZNF419Q96HQ0 510 aaPredicted RBP16.82■□□□□ 0.28
SSH3-201ENST00000308127 NPY6RQ99463 290 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
SSH3-201ENST00000308127 CIB1Q99828 191 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 TRPV6Q9H1D0 765 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 COQ10BQ9H8M1 238 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 CASS4Q9NQ75 786 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 GIMAP2Q9UG22 337 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 MPOP05164 745 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 CKMT2P17540 419 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 ETFBP38117 255 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 PRAMEP78395 509 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 TBC1D25Q3MII6 688 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 ZNF789Q5FWF6 425 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 LRRC8EQ6NSJ5 796 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 ZYG11AQ6WRX3 759 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 TXNDC5Q8NBS9 432 aaKnown RBP16.82■□□□□ 0.28
SSH3-201ENST00000308127 RP9Q8TA86 221 aaKnown RBP16.82■□□□□ 0.28
SSH3-201ENST00000308127 WNT8BQ93098 351 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 CAAP1Q9H8G2 361 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 GPRC5DQ9NZD1 345 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 SFMBT1Q9UHJ3 866 aa16.82■□□□□ 0.28
SSH3-201ENST00000308127 TMEM114B3SHH9 223 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 TPST1O60507 370 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 PMPCBO75439 489 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 UGT1A6P19224 532 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 CXCR3P49682 368 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 AFF1P51825 1210 aaKnown RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 CSHL1Q14406 222 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ANO4Q32M45 955 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 MTX3Q5HYI7 312 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 NOL9Q5SY16 702 aaKnown RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 CLEC20AQ6ZU45 233 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 LDB1Q86U70 411 aaPredicted RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 CNTD1Q8N815 330 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 FAM81AQ8TBF8 368 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 EXT2Q93063 718 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ELMO2Q96JJ3 720 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 RPL10LQ96L21 214 aaKnown RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 SLC29A1Q99808 456 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 FBRSL1Q9HCM7 1045 aaKnown RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 NUDT5Q9UKK9 219 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 DNAJC25-GNG10A0A024R161 153 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 SMIM31A0A1B0GVY4 71 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 MAGEB3O15480 346 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 HUS1O60921 280 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 NOS2P35228 1153 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ZBTB6Q15916 424 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 SLC27A1Q6PCB7 646 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 UNC93AQ86WB7 457 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ABTB1Q969K4 478 aaPredicted RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
SSH3-201ENST00000308127 OSBPL2Q9H1P3 480 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 POMKQ9H5K3 350 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ZBTB26Q9HCK0 441 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 GALNT8Q9NY28 637 aa16.81■□□□□ 0.28
SSH3-201ENST00000308127 ZNF487B1APH4 448 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 DENRO43583 198 aaKnown RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 TIMM44O43615 452 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 FOXD2O60548 495 aaPredicted RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 FAM58BPP0C7Q3 252 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 YBX3P16989 372 aaKnown RBP eCLIP16.8■□□□□ 0.28
SSH3-201ENST00000308127 SLC5A2P31639 672 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 XIAPP98170 497 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.28
SSH3-201ENST00000308127 NAB1Q13506 487 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PAFAH1B3Q15102 231 aaKnown RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 PCSK7Q16549 785 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 CLEC6AQ6EIG7 209 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 TAPT1Q6NXT6 567 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 ZBTB46Q86UZ6 589 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 TTC39CQ8N584 583 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 RNF34Q969K3 372 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 ADAM28Q9UKQ2 775 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 STAU1O95793 577 aaKnown RBP16.8■□□□□ 0.28
SSH3-201ENST00000308127 NPR3P17342 541 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 YWHAQP27348 245 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PRDX6P30041 224 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 GALK1P51570 392 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 TAS2R39P59534 338 aa16.8■□□□□ 0.28
SSH3-201ENST00000308127 PAN2Q504Q3 1202 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms