RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 FAM149B1Q96BN6 582 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 FEM1CQ96JP0 617 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 TBATAQ96M53 351 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 KLF6Q99612 283 aaPredicted RBP12.09□□□□□ -0.47
SMIM4-201ENST00000307106 HDAC8Q9BY41 377 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 SIRPGQ9P1W8 387 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 VPS28Q9UK41 221 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 HS3ST2Q9Y278 367 aa12.09□□□□□ -0.47
SMIM4-201ENST00000307106 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 C9orf172C9J069 976 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 M0QYV0 167 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 CUTAO60888 179 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 MT-CO1P00395 513 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 TSHRP16473 764 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 CD82P27701 267 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 PSMC2P35998 433 aaKnown RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 NEK3P51956 506 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 THOP1P52888 689 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 MAPK10P53779 464 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 PFN3P60673 137 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 YWHAEP62258 255 aaKnown RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 CUL2Q13617 745 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 NFIL3Q16649 462 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 RABGAP1LQ5R372 815 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 SYPL2Q5VXT5 272 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 ARL10Q8N8L6 244 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 ATP6V0D2Q8N8Y2 350 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 ATP11CQ8NB49 1132 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 KYQ8NBH2 561 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 JPH3Q8WXH2 748 aaPredicted RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 TMEM159Q96B96 161 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 PPP1R16AQ96I34 528 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 HSFY1Q96LI6 401 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 RPRD1AQ96P16 312 aaPredicted RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 LENG8Q96PV6 779 aaPredicted RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 PRMT1Q99873 361 aaKnown RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 SLC13A1Q9BZW2 595 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 CLPBQ9H078 707 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 LRRN3Q9H3W5 708 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 ZNF71Q9NQZ8 489 aaPredicted RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 IL36AQ9UHA7 158 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 KIAA1257Q9ULG3 409 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 PNMA8BQ9ULN7 279 aaPredicted RBP12.08□□□□□ -0.48
SMIM4-201ENST00000307106 DOLKQ9UPQ8 538 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 OR51B4Q9Y5P0 310 aa12.08□□□□□ -0.48
SMIM4-201ENST00000307106 K7ERQ8 282 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 ADRB3P13945 408 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 CENPCQ03188 943 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 SGCGQ13326 291 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 PTK2BQ14289 1009 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 FAXCQ5TGI0 409 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 ATCAYQ86WG3 371 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 TFAP2BQ92481 460 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 CMKLR1Q99788 373 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 MUC3BQ9H195 1237 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
SMIM4-201ENST00000307106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMIM4-201ENST00000307106 SLC12A6Q9UHW9 1150 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 FADS3Q9Y5Q0 445 aa12.07□□□□□ -0.48
SMIM4-201ENST00000307106 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 M0QYT0 321 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 SART1O43290 800 aaKnown RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 LEFTY1O75610 366 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 TRUB2O95900 331 aaKnown RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 IGLV3-25P01717 112 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 CELA2BP08218 269 aaPredicted RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 RRM1P23921 792 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 RPL13P26373 211 aaKnown RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 IRAK1P51617 712 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 KRT83P78385 493 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 ZFP36L1Q07352 338 aaKnown RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 ADAM9Q13443 819 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 ESPL1Q14674 2120 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 CNGA2Q16280 664 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 TMEM164Q5U3C3 297 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 FBXL22Q6P050 247 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 CEP57L1Q8IYX8 460 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 DENND6BQ8NEG7 585 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 PCDH19Q8TAB3 1148 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 C9orf43Q8TAL5 461 aaPredicted RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 MIB2Q96AX9 1013 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 C1QTNF2Q9BXJ5 285 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 TNKS2Q9H2K2 1166 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 FAM13BQ9NYF5 915 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 VANGL2Q9ULK5 521 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 DOPEY1Q5JWR5 2465 aa12.06□□□□□ -0.48
SMIM4-201ENST00000307106 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
SMIM4-201ENST00000307106 ANKRD17O75179 2603 aaKnown RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 IGLON5A6NGN9 336 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 STMND1H3BQB6 276 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 SMAD6O43541 496 aaKnown RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 AP1G1O43747 822 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 STX10O60499 249 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 SNAP91O60641 907 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms