RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RGS4P49798 205 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 TREML2Q5T2D2 321 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 TAF2Q6P1X5 1199 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 DCP1BQ8IZD4 617 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 ENDOVQ8N8Q3 282 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 CIB1Q99828 191 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 RHOJQ9H4E5 214 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 GOLGA2P5Q9HBQ8 144 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 SCN3BQ9NY72 215 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 A0A087X1B8 175 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 C2orf81A6NN90 581 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 ZBTB24O43167 697 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 PARNO95453 639 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 SP2Q02086 613 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 SLC18A2Q05940 514 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 KCNJ11Q14654 390 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 MTX3Q5HYI7 312 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 METTL21CQ5VZV1 264 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 DNAJC14Q6Y2X3 702 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 ZNF567Q8N184 647 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 DNAJB14Q8TBM8 379 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 AGAP2Q99490 1192 aa13.45□□□□□ -0.26
DDX54-201ENST00000306014 MRPL57Q9BQC6 102 aaKnown RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 CINPQ9BW66 212 aaPredicted RBP13.45□□□□□ -0.26
DDX54-201ENST00000306014 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 SQLEQ14534 574 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 DMC1Q14565 340 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 GRM3Q14832 879 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 CNPY1Q3B7I2 92 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 ANKS6Q68DC2 871 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 GLB1LQ6UWU2 654 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 SZRD1Q7Z422 152 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 ADCY4Q8NFM4 1077 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 GAD1Q99259 594 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 NXF3Q9H4D5 531 aaKnown RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 NOL11Q9H8H0 719 aaKnown RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 SEMA4BQ9NPR2 832 aaPredicted RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 FAM50BQ9Y247 325 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 ENDOD1O94919 500 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 LIMK2P53671 638 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 LSM12Q3MHD2 195 aaKnown RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 PRMT9Q6P2P2 845 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 TREML1Q86YW5 311 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 CLEC4CQ8WTT0 213 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 FIG4Q92562 907 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 BHMTQ93088 406 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 PRR11Q96HE9 360 aaPredicted RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 CCDC28BQ9BUN5 200 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 RSL24D1Q9UHA3 163 aaKnown RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 PCDHB12Q9Y5F1 795 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 OAS1P00973 400 aaKnown RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
DDX54-201ENST00000306014 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 ADRA1BP35368 520 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 SLC26A9Q7LBE3 791 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 RDH11Q8TC12 318 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 HIST1H2AHQ96KK5 128 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 HIST1H2AJQ99878 128 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 H2AFJQ9BTM1 129 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 WWOXQ9NZC7 414 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 ATXN10Q9UBB4 475 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 NENFQ9UMX5 172 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 TSC22D4Q9Y3Q8 395 aa13.44□□□□□ -0.26
DDX54-201ENST00000306014 SYNCRIPO60506 623 aaKnown RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 TIPRLO75663 272 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PIGRP01833 764 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 SERPINH1P50454 418 aaKnown RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 SCNN1BP51168 640 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 SLC10A6Q3KNW5 377 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 CDHR3Q6ZTQ4 885 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 TAS1R3Q7RTX0 852 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 P3H2Q8IVL5 708 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 LZTR1Q8N653 840 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PTGR2Q8N8N7 351 aaPredicted RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 OR52K2Q8NGK3 314 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 RAET1EQ8TD07 263 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 OSCP1Q8WVF1 389 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 GLMNQ92990 594 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 MIPEPQ99797 713 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 DPEP3Q9H4B8 488 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 CCDC154A6NI56 674 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 KCNU1A8MYU2 1149 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PTGES3LE9PB15 166 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 KATNA1O75449 491 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 APOA1P02647 267 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 GRM5P41594 1212 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 CPT1AP50416 773 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 C21orf59P57076 290 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 ZIK1Q3SY52 487 aaPredicted RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 FAM126BQ8IXS8 530 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 KIAA2013Q8IYS2 634 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms