RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ZCCHC23Q6ZST2 131 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 NUDCD3Q8IVD9 361 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ARRDC2Q8TBH0 407 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 WBP2Q969T9 261 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 E2F7Q96AV8 911 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PABPC5Q96DU9 382 aaKnown RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 ZNF512Q96ME7 567 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 RNF38Q9H0F5 515 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ECT2Q9H8V3 914 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ARNT2Q9HBZ2 717 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 SLC40A1Q9NP59 571 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TREX1Q9NSU2 369 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TMEM39AQ9NV64 488 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 AFF4Q9UHB7 1163 aaKnown RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 HBS1LQ9Y450 684 aaKnown RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 MUSKO15146 869 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 RAMP2O60895 175 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 VAPBO95292 243 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 AHSGP02765 367 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PROCP04070 461 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TYK2P29597 1187 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 SPRP35270 261 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 CD86P42081 329 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 IRF9Q00978 393 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DSG1Q02413 1049 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 MPP3Q13368 585 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PCLAFQ15004 111 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 MBLAC2Q68D91 279 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 KIAA1841Q6NSI8 718 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 POTEHQ6S545 545 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 NLRP9Q7RTR0 991 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 CLEC14AQ86T13 490 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 CCDC117Q8IWD4 279 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 MFSD6LQ8IWD5 586 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 LGI2Q8N0V4 545 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 GBP7Q8N8V2 638 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 AUTS2Q8WXX7 1259 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ERP27Q96DN0 273 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 MYRFLQ96LU7 910 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 CEP295NLQ96MC4 621 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 FSD1LQ9BXM9 530 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PDFQ9HBH1 243 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 GKN1Q9NS71 199 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TXNDC16Q9P2K2 825 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DCDC2Q9UHG0 476 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TCAF1Q9Y4C2 921 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ACTL7AQ9Y615 435 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ACSL4O60488 711 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 GLRA3O75311 464 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 T-ENOLP0DO92 83 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 FGF3P11487 239 aaPredicted RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 NEFHP12036 1026 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 ALDH3A1P30838 453 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 SGSHP51688 502 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 KPNA1P52294 538 aaPredicted RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 TMPRSS15P98073 1019 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 CNGA3Q16281 694 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 LRRC26Q2I0M4 334 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 PARP15Q460N3 678 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 FASTKD1Q53R41 847 aaKnown RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 FYB2Q5VWT5 728 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 PDPK2PQ6A1A2 396 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 KLHDC10Q6PID8 442 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 ASRGL1Q7L266 308 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 TMEM150AQ86TG1 271 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 ZC3HC1Q86WB0 502 aaKnown RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 DENND1CQ8IV53 801 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 DENND6AQ8IWF6 608 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 CNTN4Q8IWV2 1026 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 SLC25A41Q8N5S1 370 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 ZNF398Q8TD17 642 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 VPS39Q96JC1 886 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 PRICKLE1Q96MT3 831 aaPredicted RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 C7orf26Q96N11 449 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 LRRC37BQ96QE4 947 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 SP110Q9HB58 689 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 CYP4F11Q9HBI6 524 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 ZFP37Q9Y6Q3 630 aaPredicted RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 LTBP2Q14767 1821 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 CHD5Q8TDI0 1954 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 A0A0G2JND7 137 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 C2orf78A6NCI8 922 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 H0YHG0 523 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 PRAMEF11O60813 436 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 STC2O76061 302 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 TROVE2P10155 538 aaKnown RBP eCLIP6.63□□□□□ -1.35
USP47-201ENST00000305481 HOXD9P28356 352 aaPredicted RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 ARRB2P32121 409 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 ETFBP38117 255 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 MAPKAPK2P49137 400 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 RPS24P62847 133 aaKnown RBP6.63□□□□□ -1.35
USP47-201ENST00000305481 KCNJ2P63252 427 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 IL10RBQ08334 325 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 CTBP1Q13363 440 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 GRM3Q14832 879 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 INSCQ1MX18 579 aa6.63□□□□□ -1.35
USP47-201ENST00000305481 CTC1Q2NKJ3 1217 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms