RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PRPF39Q86UA1 669 aaKnown RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 CDKL3Q8IVW4 592 aaPredicted RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 ATP11CQ8NB49 1132 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 OR2A12Q8NGT7 310 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 CLDN23Q96B33 292 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 AGAP3Q96P47 875 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 TNKS2Q9H2K2 1166 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 CACNA2D2Q9NY47 1150 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 HPCAL4Q9UM19 191 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 NDRG2Q9UN36 371 aaKnown RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 STON1Q9Y6Q2 735 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 MYO18AQ92614 2054 aaKnown RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 TECTAO75443 2155 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 A0A1W2PQF6 199 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 SGK1O00141 431 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 TTI1O43156 1089 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 RAD51CO43502 376 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 RNF40O75150 1001 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 CTSLP07711 333 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 GKP32189 559 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 TIE1P35590 1138 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 MMP13P45452 471 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 RENBPP51606 427 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 SEC13P55735 322 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 DSC2Q02487 901 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 CKAP4Q07065 602 aaKnown RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 TRADDQ15628 312 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 HNRNPA1L2Q32P51 320 aaKnown RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 PREPLQ4J6C6 727 aaPredicted RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 DNTTIP2Q5QJE6 756 aaKnown RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 ATXN7L2Q5T6C5 722 aaPredicted RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 CWF19L1Q69YN2 538 aaKnown RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 KIAA1211LQ6NV74 962 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 C22orf39Q6P5X5 142 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 Q6ZVU0 165 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 ZNF354CQ86Y25 554 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 ZNF513Q8N8E2 541 aaPredicted RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 CHST14Q8NCH0 376 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 CASKIN2Q8WXE0 1202 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 OXNAD1Q96HP4 312 aaPredicted RBP9.63□□□□□ -0.87
RFX3-201ENST00000302303 EXOC2Q96KP1 924 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 SPATA13Q96N96 652 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 VAT1Q99536 393 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 GABRG3Q99928 467 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 LRRC1Q9BTT6 524 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 CEP44Q9C0F1 390 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 TBC1D17Q9HA65 648 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 LMAN1LQ9HAT1 526 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 GLOD4Q9HC38 313 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 NT5MQ9NPB1 228 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 PRSS16Q9NQE7 514 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 SEPT10Q9P0V9 454 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 DLGAP2Q9P1A6 1054 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 SEPT3Q9UH03 358 aa9.63□□□□□ -0.87
RFX3-201ENST00000302303 GOLGA6L10A0A0M3HER8 536 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 CFAP69A5D8W1 941 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 FAM170BA6NMN3 283 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 MTSS1O43312 755 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 DCXO43602 365 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 PI15O43692 258 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 PRLP01236 227 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 NFKB1P19838 968 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 COL9A1P20849 921 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 WASP42768 502 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 CSNK1DP48730 415 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 GEMIN4P57678 1058 aaKnown RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 MRPS21P82921 87 aaKnown RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 SKOR1P84550 965 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 SIGLEC14Q08ET2 396 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 CAMK2GQ13555 558 aaPredicted RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 TRIP13Q15645 432 aaPredicted RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 P3H1Q32P28 736 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 FBXO43Q4G163 708 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 KCTD11Q693B1 232 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 NCEH1Q6PIU2 408 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 DPY19L3Q6ZPD9 716 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 TRIM67Q6ZTA4 783 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 PID1Q7Z2X4 250 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 JAMLQ86YT9 394 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 PCDH20Q8N6Y1 951 aaKnown RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 PJA1Q8NG27 643 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 OR2AP1Q8NGE2 309 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 SPATA22Q8NHS9 363 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 IMP4Q96G21 291 aaKnown RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 FCRL5Q96RD9 977 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 NUDCD1Q96RS6 583 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 TRIM51Q9BSJ1 452 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 MLPHQ9BV36 600 aaPredicted RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 OSBPL6Q9BZF3 934 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 TM6SF2Q9BZW4 377 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 NOD2Q9HC29 1040 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 DMGDHQ9UI17 866 aaKnown RBP9.62□□□□□ -0.87
RFX3-201ENST00000302303 SLC25A13Q9UJS0 675 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 FBXL21Q9UKT6 434 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms