RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 WNT3AP56704 352 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 MAXP61244 160 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 DMTNQ08495 405 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 NAB1Q13506 487 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CDH18Q13634 790 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 MPPE1Q53F39 396 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CERCAMQ5T4B2 595 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TTC19Q6DKK2 380 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CXorf57Q6NSI4 855 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TMEM135Q86UB9 458 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CMTM8Q8IZV2 173 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TDRD5Q8NAT2 981 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 MRGPRX2Q96LB1 330 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 SMC6Q96SB8 1091 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 PBX4Q9BYU1 374 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TRABDQ9H4I3 376 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 KCNK9Q9NPC2 374 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 E2F8A0AVK6 867 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 PER2O15055 1255 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CHN1P15882 459 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 FRG1Q14331 258 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TEAD2Q15562 447 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 MPP7Q5T2T1 576 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 ARMC3Q5W041 872 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TRMT10BQ6PF06 316 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 POTEHQ6S545 545 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 KDELC1Q6UW63 502 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 RANBP10Q6VN20 620 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 LEKR1Q6ZMV7 388 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 BBS7Q8IWZ6 715 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 DDI1Q8WTU0 396 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CENPTQ96BT3 561 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 CINPQ9BW66 212 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 PRKD2Q9BZL6 878 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 NKX2-4Q9H2Z4 354 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 SOX13Q9UN79 622 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 HCFC2Q9Y5Z7 792 aa15.95■□□□□ 0.14
HERPUD1-201ENST00000300302 TMEM120BA0PK00 339 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 CBX4O00257 560 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 ZNF197O14709 1029 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 KRT37O76014 449 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 TPH1P17752 444 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 DSC2Q02487 901 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 NIPAL4Q0D2K0 466 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 PCSK7Q16549 785 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 PCID2Q5JVF3 399 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 RBM23Q86U06 439 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 PGBD5Q8N414 524 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 MDM1Q8TC05 714 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 SH3RF2Q8TEC5 729 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 PTCD2Q8WV60 388 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 ZNF669Q96BR6 464 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 TCEAL4Q96EI5 215 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 PSKH2Q96QS6 385 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 SEMA3CQ99985 751 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 LMAN2LQ9H0V9 348 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 INTS9Q9NV88 658 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 FAM169AQ9Y6X4 670 aa15.94■□□□□ 0.14
HERPUD1-201ENST00000300302 CCDC195A0A1B0GUA6 201 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 CXorf49A8MYA2 514 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 FOXO6A8MYZ6 492 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 NRG2O14511 850 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 KRT38O76015 456 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 CYBBP04839 570 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 LSP1P33241 339 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 SERPINB9P50453 376 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MGAT5Q09328 741 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 ANKRD20A4Q4UJ75 823 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 DENND5AQ6IQ26 1287 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MARK2Q7KZI7 788 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MFN1Q8IWA4 741 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 PPHLN1Q8NEY8 458 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 ARRDC2Q8TBH0 407 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 TADA1Q96BN2 335 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 CERS2Q96G23 380 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 KIFC1Q9BW19 673 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 TLE6Q9H808 572 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 ARNT2Q9HBZ2 717 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 SMYD2Q9NRG4 433 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 NKIRAS1Q9NYS0 192 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MSRAQ9UJ68 235 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 SMG5Q9UPR3 1016 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 HELZP42694 1942 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MOSPD3O75425 235 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MT-ND3P03897 115 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MMP2P08253 660 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 CREB1P16220 341 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 CES1P23141 567 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 CNTFP26441 200 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 ZNF697Q5TEC3 545 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 ALG1LQ6GMV1 187 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 GRASPQ7Z6J2 395 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 ALKBH8Q96BT7 664 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MTBPQ96DY7 904 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 MGME1Q9BQP7 344 aa15.93■□□□□ 0.14
HERPUD1-201ENST00000300302 FEM1AQ9BSK4 669 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms