RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TBC1D17Q9HA65 648 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 LTB4R2Q9NPC1 389 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ZDHHC4Q9NPG8 344 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 RBM12Q9NTZ6 932 aaKnown RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 ABCB8Q9NUT2 735 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 DNAJC17Q9NVM6 304 aaKnown RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 TMEM51Q9NW97 253 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 TMEM248Q9NWD8 314 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 DLGAP2Q9P1A6 1054 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 LCMT1Q9UIC8 334 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 GGA2Q9UJY4 613 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SLC27A6Q9Y2P4 619 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 PCDHA3Q9Y5H8 950 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ACTL7AQ9Y615 435 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 VPS13AQ96RL7 3174 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 hCG_1818297A0A087WSY0 165 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 TCRBV7S2A1N4TA0A589 114 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 KANSL1LA0AUZ9 987 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 LRRD1A4D1F6 860 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ANKRD33BA6NCL7 494 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 FAM86C2PA6NEL3 165 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 TMEM221A6NGB7 291 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ZNF487B1APH4 448 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 M0R296 226 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 MFSD11O43934 449 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 SNAP91O60641 907 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ADAM23O75077 832 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 CLDN11O75508 207 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 KRT1P04264 644 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 KRT7P08729 469 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 PYGMP11217 842 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 PABPC1P11940 636 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 KRT10P13645 584 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 EPHB2P29323 1055 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 EIF2DP41214 584 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 DGKGP49619 791 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 STK19P49842 368 aaPredicted RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 PLK1P53350 603 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 NAP1L1P55209 391 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 PRKCQQ04759 706 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 MTA1Q13330 715 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 HADHQ16836 314 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 PLEKHG6Q3KR16 790 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 PITRM1Q5JRX3 1037 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 EGFLAMQ63HQ2 1017 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 SLC9A4Q6AI14 798 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 GRAMD4Q6IC98 578 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 RWDD4Q6NW29 188 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 NPNTQ6UXI9 565 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 SPOCD1Q6ZMY3 1216 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 Q6ZS52 159 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 RHOT1Q8IXI2 618 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 UMODL1-AS1Q8N2C9 162 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 SLC35F6Q8N357 371 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 CCDC33Q8N5R6 958 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 PJA1Q8NG27 643 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 CYB5D2Q8WUJ1 264 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 FAM3CQ92520 227 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ARHGEF2Q92974 986 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 TTC17Q96AE7 1141 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 CLDN23Q96B33 292 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ZNF419Q96HQ0 510 aaPredicted RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 CELF6Q96J87 481 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 MRGPRX3Q96LB0 322 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 PNKPQ96T60 521 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ACOX2Q99424 681 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ZNF670Q9BS34 389 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 FEM1AQ9BSK4 669 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 ACE2Q9BYF1 805 aaPredicted RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 SLC2A11Q9BYW1 496 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 LRRC19Q9H756 370 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 CD248Q9HCU0 757 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 RCOR3Q9P2K3 495 aaPredicted RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 DNAI1Q9UI46 699 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 FBXL21Q9UKT6 434 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 AMFRQ9UKV5 643 aa6.04□□□□□ -1.44
SSX3-201ENST00000298396 NDRG2Q9UN36 371 aaKnown RBP6.04□□□□□ -1.44
SSX3-201ENST00000298396 CACNA1EQ15878 2313 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZNF106Q9H2Y7 1883 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 WDR87Q6ZQQ6 2873 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 ILVBLA1L0T0 632 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 FAM170BA6NMN3 283 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 WASH3PC4AMC7 463 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 RASA4BC9J798 803 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 H0Y626 953 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 H3BRJ5 948 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 EIF1AYO14602 144 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 ENC1O14682 589 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 EREGO14944 169 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 FGF10O15520 208 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZSCAN12O43309 604 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 RASA4O43374 803 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 SMAD6O43541 496 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 NRDCO43847 1150 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 CPNE3O75131 537 aaKnown RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 ZNF821O75541 412 aaPredicted RBP6.03□□□□□ -1.44
SSX3-201ENST00000298396 PEX11BO96011 259 aa6.03□□□□□ -1.44
SSX3-201ENST00000298396 MT-CO1P00395 513 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms