RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 PPWD1Q96BP3 646 aaKnown RBP13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 FBXL8Q96CD0 374 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 CNDP2Q96KP4 475 aaKnown RBP13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 APBA2Q99767 749 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 GBA2Q9HCG7 927 aaPredicted RBP13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 SPAG4Q9NPE6 437 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 DTLQ9NZJ0 730 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 MSCO60682 206 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 CABYRO75952 493 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 TNNC2P02585 160 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 S100A1P23297 94 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 EPHX2P34913 555 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 EIF2B2P49770 351 aaKnown RBP13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 MERTKQ12866 999 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 NFATC3Q12968 1075 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 CYP2A13Q16696 494 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 BSPRYQ5W0U4 402 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 REP15Q6BDI9 236 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 HMGCLL1Q8TB92 370 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 OSBPL10Q9BXB5 764 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 TRPC7Q9HCX4 862 aa13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 GPC6Q9Y625 555 aaPredicted RBP13.69□□□□□ -0.22
RPUSD4-201ENST00000298317 CFAP99D6REC4 459 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 B4GALT4O60513 344 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 F7P08709 466 aaPredicted RBP13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 NPR1P16066 1061 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 NCBP2-AS2Q69YL0 99 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 FAM117BQ6P1L5 589 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 CAMK1DQ8IU85 385 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 CBR4Q8N4T8 237 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 KDM1BQ8NB78 822 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 MRPL4Q9BYD3 311 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 DNAI2Q9GZS0 605 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 RIC8BQ9NVN3 520 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 GIN1Q9NXP7 522 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 SIX4Q9UIU6 781 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 ZNF839A8K0R7 811 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 HACD1B0YJ81 288 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 GOLGA8TH3BQL2 631 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 SDHDO14521 159 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 CNOT3O75175 753 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 VDRP11473 427 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 CYP3A5P20815 502 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 SDC4P31431 198 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 NAGLUP54802 743 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 STX5Q13190 355 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 FRG1Q14331 258 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 C8orf82Q6P1X6 216 aaPredicted RBP13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 OLFM1Q99784 485 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 C1QTNF1Q9BXJ1 281 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 FTHL17Q9BXU8 183 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 ADAMTS10Q9H324 1103 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
RPUSD4-201ENST00000298317 SAC3D1A6NKF1 404 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ZNF182P17025 639 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 GRM5P41594 1212 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 CD300CQ08708 224 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 SNRNP48Q6IEG0 339 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 SIX6OS1Q8N1H7 587 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ANKRD52Q8NB46 1076 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 PCYOX1LQ8NBM8 494 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ACVR1CQ8NER5 493 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 OR2T34Q8NGX1 318 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 OR2T3Q8NH03 318 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 FAM110BQ8TC76 370 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 CANT1Q8WVQ1 401 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 FAM151AQ8WW52 585 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 PGLYRP2Q96PD5 576 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 CSPG4P5Q96PW8 444 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 TUBA1CQ9BQE3 449 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 MAFBQ9Y5Q3 323 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ANK1P16157 1881 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 TIMM44O43615 452 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 CPNE6O95741 557 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 KRT19P08727 400 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ABCG1P45844 678 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 FSTL1Q12841 308 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ZBTB17Q13105 803 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 DGKDQ16760 1214 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 SAMD4BQ5PRF9 694 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 KCTD8Q6ZWB6 473 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 DHFR2Q86XF0 187 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 CXorf38Q8TB03 319 aa13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 KHSRPQ92945 711 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 ZNF669Q96BR6 464 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-201ENST00000298317 UPF3AQ9H1J1 476 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms