RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 JAM2P57087 298 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 RAB10P61026 200 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 IL5RAQ01344 420 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 EML3Q32P44 896 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 OTUD3Q5T2D3 398 aaPredicted RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 MON1BQ7L1V2 547 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 SYT12Q8IV01 421 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 SPATA6LQ8N4H0 392 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PIWIL2Q8TC59 973 aaKnown RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 DTNBP1Q96EV8 351 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PPP1R16AQ96I34 528 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 BBS2Q9BXC9 721 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 TNPO3Q9Y5L0 923 aaKnown RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 A0A1W2PQH9 124 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 TBC1D3BA6NDS4 549 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 HPGDP15428 266 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 ELNP15502 786 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PPP2R1BP30154 601 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 LCLAT1Q6UWP7 414 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 LRRC49Q8IUZ0 686 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 ZNF557Q8N988 423 aaPredicted RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 NDRG1Q92597 394 aaKnown RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 FCRL2Q96LA5 508 aaPredicted RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 MBOAT7Q96N66 472 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 OMDQ99983 421 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 MMADHCQ9H3L0 296 aaPredicted RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 KLQ9UEF7 1012 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 CARNS1A5YM72 827 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 SNX3O60493 162 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PAGE1O75459 146 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 FLT3P36888 993 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 MRPS15P82914 257 aaKnown RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 SNX30Q5VWJ9 437 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 RNF145Q96MT1 663 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 RERGLQ9H628 205 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 ACSS3Q9H6R3 686 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 ATP13A3Q9H7F0 1226 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 MSI1O43347 362 aaKnown RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 LRPAP1P30533 357 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 GPR15P49685 360 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PLEKHA7Q6IQ23 1121 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 HJURPQ8NCD3 748 aaPredicted RBP17.42■□□□□ 0.38
CDCP1-201ENST00000296129 NCKAP1Q9Y2A7 1128 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 TLR5O60602 858 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 SP100P23497 879 aaPredicted RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 ICAM3P32942 547 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 HPCAL1P37235 193 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 DEFA1P59665 94 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 DEFA3P59666 94 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 XRCC4Q13426 336 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 RAD23AP54725 363 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 HSPA14Q0VDF9 509 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 ITGA7Q13683 1181 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 PCDH20Q8N6Y1 951 aaKnown RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 MTMR14Q8NCE2 650 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 P2RY11Q96G91 374 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 LOC102724159A0A0B4J2E5 919 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 TCRBV9S1A1TA0A576 114 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 CLPTM1O96005 669 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 TFEBP19484 476 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 MBTD1Q05BQ5 628 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 CTBP1Q13363 440 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 TUSC3Q13454 348 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 PWP2Q15269 919 aaKnown RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 EXOC3L1Q86VI1 746 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 BDH2Q9BUT1 245 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 COL14A1Q05707 1796 aaKnown RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 FAM58BPP0C7Q3 252 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 ATP5F1P24539 256 aaPredicted RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 TKTP29401 623 aaKnown RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 LRRC74BQ6ZQY2 392 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 EID3Q8N140 333 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 FIBCD1Q8N539 461 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 CXorf40AQ8TE69 158 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 MAGEB10Q96LZ2 347 aaPredicted RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 RAD18Q9NS91 495 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 PSMD12O00232 456 aaPredicted RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 S100A3P33764 101 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 TTPAP49638 278 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 AIF1P55008 147 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 EIF2B5Q13144 721 aaKnown RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 KCTD15Q96SI1 283 aaPredicted RBP17.41■□□□□ 0.38
CDCP1-201ENST00000296129 SEMA6AQ9H2E6 1030 aa17.41■□□□□ 0.38
CDCP1-201ENST00000296129 CTPS1P17812 591 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 NOGQ13253 232 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 SAMD4BQ5PRF9 694 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 SOWAHBA6NEL2 793 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 SLC9A3R1O14745 358 aaPredicted RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 ALOX15BO15296 676 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 ANXA5P08758 320 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 OR4Q2P0C623 313 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 LBPP18428 481 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 TARBP2Q15633 366 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 PDK4Q16654 411 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 BRMS1LQ5PSV4 323 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 ZNF621Q6ZSS3 439 aa17.4■□□□□ 0.38
CDCP1-201ENST00000296129 MARK2Q7KZI7 788 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
CDCP1-201ENST00000296129 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms