RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 CCDC114Q96M63 670 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 HSPA12BQ96MM6 686 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 OMDQ99983 421 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 BTBD1Q9H0C5 482 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 C6orf106Q9H6K1 298 aaPredicted RBP13.6□□□□□ -0.23
VPS28-201ENST00000292510 ZDHHC6Q9H6R6 413 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 IL36AQ9UHA7 158 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 IPO11Q9UI26 975 aaKnown RBP13.6□□□□□ -0.23
VPS28-201ENST00000292510 SCML1Q9UN30 329 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
VPS28-201ENST00000292510 WASF2Q9Y6W5 498 aa13.6□□□□□ -0.23
VPS28-201ENST00000292510 CXorf51AA0A1B0GTR3 108 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 BCLAF3A2AJT9 711 aaKnown RBP13.59□□□□□ -0.23
VPS28-201ENST00000292510 FAM47DPA6NHR8 397 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 BTNL10A8MVZ5 291 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 KPNA3O00505 521 aaPredicted RBP13.59□□□□□ -0.23
VPS28-201ENST00000292510 LEFTY1O75610 366 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 GSRP00390 522 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 TGM1P22735 817 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 MPLP40238 635 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 RHOAP61586 193 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
VPS28-201ENST00000292510 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.59□□□□□ -0.23
VPS28-201ENST00000292510 USP30Q70CQ3 517 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 CYP2U1Q7Z449 544 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 LRRC8AQ8IWT6 810 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 OR2AP1Q8NGE2 309 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 LRRN4Q8WUT4 740 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 PIGKQ92643 395 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 VOPP1Q96AW1 172 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 ARRDC3Q96B67 414 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
VPS28-201ENST00000292510 ZNF419Q96HQ0 510 aaPredicted RBP13.59□□□□□ -0.23
VPS28-201ENST00000292510 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 HEPHQ9BQS7 1158 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 SP110Q9HB58 689 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 LHX3Q9UBR4 397 aa13.59□□□□□ -0.23
VPS28-201ENST00000292510 MACROD2A1Z1Q3 448 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 KRIT1O00522 736 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 INSIG1O15503 277 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 PSTPIP1O43586 416 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 PALMO75781 387 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 SEMA4FO95754 770 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 MAOBP27338 520 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 SERPINB6P35237 376 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 RGRP47804 291 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
VPS28-201ENST00000292510 GBE1Q04446 702 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 IL10RBQ08334 325 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 PAFAH1B3Q15102 231 aaKnown RBP13.58□□□□□ -0.24
VPS28-201ENST00000292510 LLGL1Q15334 1064 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 AGBL4Q5VU57 503 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 FAM46CQ5VWP2 391 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 TCEAL6Q6IPX3 200 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 MFSD7Q6UXD7 560 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 KIAA2013Q8IYS2 634 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 ATPAF2Q8N5M1 289 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 TMIEQ8NEW7 156 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 OR14C36Q8NHC7 312 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 CASKIN2Q8WXE0 1202 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 KRT35Q92764 455 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 TCEAL3Q969E4 200 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 SGK2Q9HBY8 427 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 EVLQ9UI08 416 aaPredicted RBP13.58□□□□□ -0.24
VPS28-201ENST00000292510 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.24
VPS28-201ENST00000292510 GRID2IPA4D2P6 1211 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 MEI4A8MW99 385 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 PATE3B3GLJ2 98 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 ARHGAP6O43182 974 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 MAFKO60675 156 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 GJB3O75712 270 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 FSBPO95073 299 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 PEX11BO96011 259 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 PRNPP04156 253 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 ADPRHP54922 357 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 CCZ1BP86790 482 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
VPS28-201ENST00000292510 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 KIF5AQ12840 1032 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 SFSWAPQ12872 951 aaKnown RBP13.57□□□□□ -0.24
VPS28-201ENST00000292510 SLC10A2Q12908 348 aaPredicted RBP13.57□□□□□ -0.24
VPS28-201ENST00000292510 SF3A2Q15428 464 aaKnown RBP13.57□□□□□ -0.24
VPS28-201ENST00000292510 MYLK3Q32MK0 819 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 ODF2Q5BJF6 829 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 SPDYCQ5MJ68 293 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 PLA2G2CQ5R387 149 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 DCAF12L1Q5VU92 463 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 NCEH1Q6PIU2 408 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 RGL4Q8IZJ4 473 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 PLD5Q8N7P1 536 aa13.57□□□□□ -0.24
VPS28-201ENST00000292510 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms