RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PEBP4Q96S96 227 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 CNPY3Q9BT09 278 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 SYT11Q9BT88 431 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 CNTNAP3Q9BZ76 1288 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 TTYH3Q9C0H2 523 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 SLC32A1Q9H598 525 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 DHX35Q9H5Z1 703 aaKnown RBP9.98□□□□□ -0.81
CCDC58-201ENST00000291458 FZD3Q9NPG1 666 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 DYRK4Q9NR20 520 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 ZNF212Q9UDV6 495 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 FZD4Q9ULV1 537 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 FZD10Q9ULW2 581 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 MYO6Q9UM54 1294 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 SCML1Q9UN30 329 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 AP4E1Q9UPM8 1137 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 WDR87Q6ZQQ6 2873 aa9.98□□□□□ -0.81
CCDC58-201ENST00000291458 WNT9AO14904 365 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 BUB1O43683 1085 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 RAMP2O60895 175 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 LEFTY1O75610 366 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 RHOQP17081 205 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 MAPKAPK2P49137 400 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 RPIAP49247 311 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 CCNHP51946 323 aaPredicted RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 FAM193AP78312 1265 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 CA9Q16790 459 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 SMTNL2Q2TAL5 461 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 PPP6R3Q5H9R7 873 aaPredicted RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 AGBL4Q5VU57 503 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 FAM46CQ5VWP2 391 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 RETSATQ6NUM9 610 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 DPY19L3Q6ZPD9 716 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 NLRP14Q86W24 1093 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 NAXDQ8IW45 347 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 OR2A12Q8NGT7 310 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 CENPIQ92674 756 aaPredicted RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 NTAN1Q96AB6 310 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 BTBD6Q96KE9 485 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 EXOC2Q96KP1 924 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 SNRNP25Q9BV90 132 aaKnown RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 ACE2Q9BYF1 805 aaPredicted RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 XPO4Q9C0E2 1151 aaKnown RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 PCED1AQ9H1Q7 454 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 EBF2Q9HAK2 575 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 PARVAQ9NVD7 372 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 TMEM248Q9NWD8 314 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
CCDC58-201ENST00000291458 IL36AQ9UHA7 158 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 ANKRD6Q9Y2G4 727 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 ANKRD36A6QL64 1941 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 CACNA1AO00555 2505 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 NCOR2Q9Y618 2525 aa9.97□□□□□ -0.81
CCDC58-201ENST00000291458 SHROOM3Q8TF72 1996 aa9.96□□□□□ -0.81
CCDC58-201ENST00000291458 A0A1W2PPC4 97 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 H0Y8X5 98 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 EEF2KO00418 725 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 KRIT1O00522 736 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 MCF2LO15068 1137 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ALOX15BO15296 676 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 PLRG1O43660 514 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 RNGTTO60942 597 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ZMPSTE24O75844 475 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 PCDH8O95206 1070 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 PRNPP04156 253 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 WNT1P04628 370 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 GYPCP04921 128 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 CD59P13987 128 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 CSRP1P21291 193 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 SLC19A1P41440 591 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 SSR1P43307 286 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 GRIA4P48058 902 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 SCAPQ12770 1279 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 SEMA3BQ13214 749 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 POLD3Q15054 466 aaPredicted RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 PIP5KL1Q5T9C9 394 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ARHGEF2Q92974 986 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 HMCESQ96FZ2 354 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 KCTD15Q96SI1 283 aaPredicted RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ORAI3Q9BRQ5 295 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 KLC2Q9H0B6 622 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 OSBPL2Q9H1P3 480 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ZWILCHQ9H900 591 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 TM7SF3Q9NS93 570 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 EVA1BQ9NVM1 165 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 DNAAF2Q9NVR5 837 aaKnown RBP9.96□□□□□ -0.82
CCDC58-201ENST00000291458 AIPL1Q9NZN9 384 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ADAMTS1Q9UHI8 967 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ANGPTL2Q9UKU9 493 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 PPM1HQ9ULR3 514 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 HPCAL4Q9UM19 191 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 ITM2BQ9Y287 266 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
CCDC58-201ENST00000291458 RASA4BC9J798 803 aa9.95□□□□□ -0.82
CCDC58-201ENST00000291458 DFFAO00273 331 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms